Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq14 333 3e-86 seq88 111 2e-19 >seq14 Length=442650 Score = 333 bits (368), Expect = 3e-86 Identities = 1179/1825 (65%), Gaps = 29/1825 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||||||| ||| |||| | |||||||||||||| || |||||||| | Sbjct 87150 TGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 87209 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 || |||||||| | | ||||| | | |||| | || || || | |||| Sbjct 87210 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTGGG-CTCACGCATG 87268 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||| | | || || || ||||||||| || || || || | ||| | | Sbjct 87269 TGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCAGACATCTG---C 87325 Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 ||| | || ||| || |||||| || ||| |||| | ||| ||||| | ||| Sbjct 87326 ACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCGGG 87385 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCC 118097 || ||| || ||||| || ||| | | | | |||| | | ||||||| || Sbjct 87386 ATGCTGGGGATGTTCTGGATAGAACCATCTTC---GGCAATGATACGGTTCTTCATAGCC 87442 Query 118098 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 118157 | ||||| |||||||||| | | || ||| | || ||||| || ||| Sbjct 87443 TCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCTGGAAC 87502 Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217 || || || || |||| | | ||||| || | ||||||||||| |||||||| ||| Sbjct 87503 TCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCGTTG 87562 Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 || |||| || || | |||||| || || |||||||| ||||| | | |||||| ||| Sbjct 87563 TTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTGTTTCGG 87622 Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCT 118335 | ||| | ||| | || | |||| | ||| |||||||| | | | || | Sbjct 87623 ATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAGAAGGCTGG 87682 Query 118336 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 118395 | || |||||| ||| | || || || || || | || |||||||| |||||| Sbjct 87683 ACGCC--CCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGTATGTCT 87740 Query 118396 CATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTG 118455 |||||||| ||||||| || | ||| | ||| | || ||||| || || | Sbjct 87741 GGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGTAGATGG 87800 Query 118456 TTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 118514 | || || || | |||| || | | |||| ||| ||||| | | ||| Sbjct 87801 TCTCGAAGATCTGTTTGTTCAGCTGGCGAG-CCTCAGGGGACTCAAATGGCATGCGGAGA 87859 Query 118515 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 118574 | || |||| || ||||| |||||||| | ||||| || | |||| ||| || Sbjct 87860 GCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGTTG 87919 Query 118575 GACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 || || || |||||| || || ||| || | | | || || || Sbjct 87920 CTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGA 87979 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 118694 || |||| |||| || || || | | | | | | | | | || | | Sbjct 87980 ACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCGTAGTCA 88039 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||||| || || || || || ||||| || || |||| |||||| | || | Sbjct 88040 ACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAG 88099 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| || || || ||||||| ||| || || ||||| |||| |||||| || || Sbjct 88100 TACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTG 88159 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| ||| || ||||||||||| |||||| | || | || ||||| || |||| | Sbjct 88160 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCC 88219 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933 | ||| || || | ||| | | || | ||| || || | | | || || ||| Sbjct 88220 TCGAGGATGGCGTACCACAGCTTCTG-AGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCT 88278 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 ||||||||| ||| || || || ||||| ||||| | || | || || || Sbjct 88279 CTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 88338 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || | ||||| | ||| | ||| | || || |||||||||||||||||||||||| Sbjct 88339 CTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTC 88398 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 || |||||||| || |||||| || || || | || || | || || || Sbjct 88399 AGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTT 88458 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 ||||| || | || || | || ||| |||||||| || |||||||| | |||| | Sbjct 88459 TCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGC 88518 Query 119174 CCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 || ||| | |||| |||||| || || | |||||| ||| || |||||||| Sbjct 88519 ACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAG 88578 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCT 119288 ||| ||||||||||| | || ||| || || || ||| || ||| | | |||| Sbjct 88579 CATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCC--AGTGGCA 88636 Query 119289 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCC 119348 | || | ||||| || || ||||||||| || ||| ||| ||||| ||||| | Sbjct 88637 CGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTC 88696 Query 119349 GTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTC 119408 ||||| | ||||||| || || || |||| |||| | ||| ||||||||| | Sbjct 88697 TTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAC 88756 Query 119409 GACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATA 119468 |||| |||||| ||| |||||||| ||||| || || || | ||||| |||| | Sbjct 88757 GACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAAT 88816 Query 119469 CCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 119528 || |||||| || ||| ||||| | || ||| || || || ||||| Sbjct 88817 TTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCA 88876 Query 119529 ATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGG 119588 | | || ||||| | ||||| || || ||| | | | ||||||||| | || Sbjct 88877 ACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGG 88936 Query 119589 AGGTAACTCTTCTCCAAGGTCTTGA 119613 ||||| | |||||||||||||| Sbjct 88937 AGGTATGACCGCTCCAAGGTCTTGA 88961 >seq88 Length=140259 Score = 111 bits (122), Expect = 2e-19 Identities = 295/447 (66%), Gaps = 8/447 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 56902 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 56961 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | || || | | | || | |||| |||||||| Sbjct 56962 AAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTG-CCAAGGGCGACAAGGAGACG 57020 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | ||| |||| ||||||| |||| | || |||||| |||| || | || Sbjct 57021 GTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGACTGCA 57080 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| ||||||||||| | || || || | ||| | Sbjct 57081 GGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGATGATCTTCTC 57140 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAACTC 130023 | | || ||| || | || | || ||| || || | || || || Sbjct 57141 GACACGCGCCTTGCTGGGGCGGTTCCTCAGGTGAGAGAACAG---CAGGCAAGCGAAGTC 57197 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| ||||| || || || |||||| |||||| ||||| | Sbjct 57198 AGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCAGGCATCAA 57257 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||||| |||||| || | || | || ||||||||| ||||| || Sbjct 57258 ACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAAC 57317 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGC 130170 | ||||| |||| ||||||| ||| Sbjct 57318 AGCAGCGAAGGCAACCAGACGCTGAGC 57344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431528041000