Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq14 343 2e-89
seq88 116 4e-21
>seq14
Length=442650
Score = 343 bits (380), Expect = 2e-89
Identities = 1161/1780 (65%), Gaps = 51/1780 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| ||||||| || || | ||||| || || || ||||| ||
Sbjct 88905 CCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATTGAGAGAGTT 88846
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341
| ||||| ||| || |||||| || | |||| |||||| | || || || |||
Sbjct 88845 ATTGAGACGTACAACCTGATGTCGCACAAATTCTTCACGCACGCATCGCCTACACTGTTC 88786
Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401
||||||||||| || || || |||| |||||||| ||| || ||||| |||
Sbjct 88785 AATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGACATGAAGGATGAC 88726
Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCTG 104459
|| | |||||||| | ||||| | | | | ||||| | ||||| ||| ||| |
Sbjct 88725 AGTATTGAAGGTATCTACGATACTCTCAAG-ACT-TGCGCCATGATCTCCAAGATGGCCG 88668
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| |||||||| || || |||| | | | |||| | ||| || || || |
Sbjct 88667 GAGGTATTGGTCTGAACGTCCACCGTATCCGTGCCACTGGCTCTTACATCGCCGGTACCA 88608
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| || ||| | ||||| ||||| |||||||| || || ||| ||| || || || |
Sbjct 88607 ACGGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACG 88548
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| | || | ||| ||||| || || |||| |||| || ||||||||||
Sbjct 88547 TTGACCAGGGTGGTAATAAGCGTCCT---GGTGCTTTCGCTATCTACCTGGAGCCATGGC 88491
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| ||| || | |||||||| || ||||| ||||| ||| | ||||||| ||
Sbjct 88490 ACGCTGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGAG 88431
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|||||| |||||| |||||||||||||| || |||||||||||| | |||||| |||
Sbjct 88430 CCCGCGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGA 88371
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
||| | ||| | ||| | || || || || ||||| || | || | ||||
Sbjct 88370 ACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTG 88311
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871
| ||||| || || || ||| ||||||||| |||||| | ||| | || ||| |
Sbjct 88310 ACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCC--GCGGCCGCAAGACCAT 88253
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| ||| | || | ||||| | || || ||| || | || |||||||| || | || |
Sbjct 88252 GAAGGCT-CAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCTT 88194
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| ||||| || ||||| |||| ||||| || || ||||| |||| |||
Sbjct 88193 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCC 88134
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| ||||| || || || || ||| | || | | |||||| |||||| |
Sbjct 88133 GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCT 88074
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGAT 105109
| ||||| || || || ||||| || ||||| || | | | |||| | | |
Sbjct 88073 GCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGC-TACAAC 88015
Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169
| | | |||||||| || || | || ||||| |||| | ||||||
Sbjct 88014 TTCCAGCACCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACCTGAACAAGATCATTGAT 87955
Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229
|| |||||||| || || || || ||| ||||| | || ||||||
Sbjct 87954 GTCAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGT 87895
Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGA 105288
| ||||| |||||||| || |||| ||| || | || || | ||||||| |||
Sbjct 87894 GTTGGTGTCCAGGGTCTTGCCGATGCCTTC-TTGGCTCTCCGCATGCCATTTGAGTCCCC 87836
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GG 105347
|| || | | || | || || |||||||| || ||||| ||| |||| |
Sbjct 87835 TGAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCACGCTGCT-TTGACTG 87777
Query 105348 CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 105407
|| || || | || ||||||| || ||||| | || | ||||| || || | |
Sbjct 87776 CGTCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCCCCCGTCT 87717
Query 105408 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGG 105467
| || || |||||||| ||| ||||||| | || | || | |||||||
Sbjct 87716 CGCAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTTTGGGACTGGG 87657
Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527
| ||| | |||| | ||||||||| | ||| | || ||||| | | ||||| || |
Sbjct 87656 ATGCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCGCCCA 87597
Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587
|||| || || ||||| | || || |||| || || || ||||| || || |||||
Sbjct 87596 TGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCT 87537
Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATC 105644
| |||||||| | | || | || || || ||||| | | ||||| | || |
Sbjct 87536 CTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTAC 87477
Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCATGG 105701
|| | ||||| | |||||||||||| ||||| ||| ||||||| | | |||| |
Sbjct 87476 TCAGG---GACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATCATTG 87420
Query 105702 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGT 105761
|| | |||||| || || || || || || || || ||| ||||
Sbjct 87419 CCGAA---GATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGT 87363
Query 105762 ACCGCACAGTTTGGGAAATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818
|| || || |||||| || ||| || | || | | ||| | || || || |
Sbjct 87362 ACAAGACCGTCTGGGAAGTCTCTCAGAGGACGATTG---TGCAGATGTCTGCTGACCGCG 87306
Query 105819 GTCGCTTCATTGATCAAAGTCAAAG--TATGAATCTCTTCATG-GAAAGTCCAACGATGT 105875
|| |||||| || | |||| || | | || || |||| | || || ||||||
Sbjct 87305 GTGCCTTCATCGACC--AGTCGCAGTCTCTCAACATCCACATGCGTGAG-CCCACGATGG 87249
Query 105876 CCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935
|||| || || |||||| | | | |||||| ||||||||| || || ||||| |
Sbjct 87248 GCAAGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAGACTGGCATGTACT 87189
Query 105936 ACCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 105974
||||||| || |||| ||| || ||| ||||||||||
Sbjct 87188 ACCTCCGCACTCAGGCGGCGGCAGCACCC-ATTCAGTTCA 87150
>seq88
Length=140259
Score = 116 bits (128), Expect = 4e-21
Identities = 156/214 (73%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790
|||||| || || | ||||| || || ||||| |||||||| | || | ||||
Sbjct 57411 AGTTCCCTGCATCCGTAAGAAGGCCGACTGGGCCCTGAAGTGGATCACGGACCACGAGTC 57352
Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
| ||| ||| |||| || | || || || ||||||||||||||||||| ||
Sbjct 57351 ---TACCTACGCTCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGG 57295
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
| | ||| | | || | ||||| |||||||| ||| | ||||| ||||| ||||||
Sbjct 57294 TGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTC 57235
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
||||||||| ||||||||||||||||| || |||
Sbjct 57234 CAACGAGCTGATCTCTCGTGACGAGGGTCTGCAC 57201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257336889000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |