Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 343 2e-89 seq88 116 4e-21 >seq14 Length=442650 Score = 343 bits (380), Expect = 2e-89 Identities = 1161/1780 (65%), Gaps = 51/1780 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || | ||||| || || || ||||| || Sbjct 88905 CCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATTGAGAGAGTT 88846 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || |||||| || | |||| |||||| | || || || ||| Sbjct 88845 ATTGAGACGTACAACCTGATGTCGCACAAATTCTTCACGCACGCATCGCCTACACTGTTC 88786 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 ||||||||||| || || || |||| |||||||| ||| || ||||| ||| Sbjct 88785 AATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGACATGAAGGATGAC 88726 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGCTG 104459 || | |||||||| | ||||| | | | | ||||| | ||||| ||| ||| | Sbjct 88725 AGTATTGAAGGTATCTACGATACTCTCAAG-ACT-TGCGCCATGATCTCCAAGATGGCCG 88668 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| || || |||| | | | |||| | ||| || || || | Sbjct 88667 GAGGTATTGGTCTGAACGTCCACCGTATCCGTGCCACTGGCTCTTACATCGCCGGTACCA 88608 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || ||| | ||||| ||||| |||||||| || || ||| ||| || || || | Sbjct 88607 ACGGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACG 88548 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| ||||| || || |||| |||| || |||||||||| Sbjct 88547 TTGACCAGGGTGGTAATAAGCGTCCT---GGTGCTTTCGCTATCTACCTGGAGCCATGGC 88491 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| || | |||||||| || ||||| ||||| ||| | ||||||| || Sbjct 88490 ACGCTGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGAG 88431 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 |||||| |||||| |||||||||||||| || |||||||||||| | |||||| ||| Sbjct 88430 CCCGCGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGA 88371 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | ||| | || || || || ||||| || | || | |||| Sbjct 88370 ACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTG 88311 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 | ||||| || || || ||| ||||||||| |||||| | ||| | || ||| | Sbjct 88310 ACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCC--GCGGCCGCAAGACCAT 88253 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | ||| | || | ||||| | || || ||| || | || |||||||| || | || | Sbjct 88252 GAAGGCT-CAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCTT 88194 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || ||||| |||| ||||| || || ||||| |||| ||| Sbjct 88193 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCC 88134 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| || || || || ||| | || | | |||||| |||||| | Sbjct 88133 GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCT 88074 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGAT 105109 | ||||| || || || ||||| || ||||| || | | | |||| | | | Sbjct 88073 GCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGC-TACAAC 88015 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | | |||||||| || || | || ||||| |||| | |||||| Sbjct 88014 TTCCAGCACCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACCTGAACAAGATCATTGAT 87955 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || |||||||| || || || || ||| ||||| | || |||||| Sbjct 87954 GTCAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGT 87895 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGA 105288 | ||||| |||||||| || |||| ||| || | || || | ||||||| ||| Sbjct 87894 GTTGGTGTCCAGGGTCTTGCCGATGCCTTC-TTGGCTCTCCGCATGCCATTTGAGTCCCC 87836 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GG 105347 || || | | || | || || |||||||| || ||||| ||| |||| | Sbjct 87835 TGAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCACGCTGCT-TTGACTG 87777 Query 105348 CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 105407 || || || | || ||||||| || ||||| | || | ||||| || || | | Sbjct 87776 CGTCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCCCCCGTCT 87717 Query 105408 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGG 105467 | || || |||||||| ||| ||||||| | || | || | ||||||| Sbjct 87716 CGCAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTTTGGGACTGGG 87657 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 | ||| | |||| | ||||||||| | ||| | || ||||| | | ||||| || | Sbjct 87656 ATGCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCGCCCA 87597 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || || ||||| | || || |||| || || || ||||| || || ||||| Sbjct 87596 TGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCT 87537 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATC 105644 | |||||||| | | || | || || || ||||| | | ||||| | || | Sbjct 87536 CTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTAC 87477 Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCATGG 105701 || | ||||| | |||||||||||| ||||| ||| ||||||| | | |||| | Sbjct 87476 TCAGG---GACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATCATTG 87420 Query 105702 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGT 105761 || | |||||| || || || || || || || || ||| |||| Sbjct 87419 CCGAA---GATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGT 87363 Query 105762 ACCGCACAGTTTGGGAAATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 || || || |||||| || ||| || | || | | ||| | || || || | Sbjct 87362 ACAAGACCGTCTGGGAAGTCTCTCAGAGGACGATTG---TGCAGATGTCTGCTGACCGCG 87306 Query 105819 GTCGCTTCATTGATCAAAGTCAAAG--TATGAATCTCTTCATG-GAAAGTCCAACGATGT 105875 || |||||| || | |||| || | | || || |||| | || || |||||| Sbjct 87305 GTGCCTTCATCGACC--AGTCGCAGTCTCTCAACATCCACATGCGTGAG-CCCACGATGG 87249 Query 105876 CCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 |||| || || |||||| | | | |||||| ||||||||| || || ||||| | Sbjct 87248 GCAAGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAGACTGGCATGTACT 87189 Query 105936 ACCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 105974 ||||||| || |||| ||| || ||| |||||||||| Sbjct 87188 ACCTCCGCACTCAGGCGGCGGCAGCACCC-ATTCAGTTCA 87150 >seq88 Length=140259 Score = 116 bits (128), Expect = 4e-21 Identities = 156/214 (73%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790 |||||| || || | ||||| || || ||||| |||||||| | || | |||| Sbjct 57411 AGTTCCCTGCATCCGTAAGAAGGCCGACTGGGCCCTGAAGTGGATCACGGACCACGAGTC 57352 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | ||| ||| |||| || | || || || ||||||||||||||||||| || Sbjct 57351 ---TACCTACGCTCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGG 57295 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 | | ||| | | || | ||||| |||||||| ||| | ||||| ||||| |||||| Sbjct 57294 TGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTC 57235 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||||| ||||||||||||||||| || ||| Sbjct 57234 CAACGAGCTGATCTCTCGTGACGAGGGTCTGCAC 57201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257336889000