Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq14 466 2e-126 >seq14 Length=442650 Score = 466 bits (516), Expect = 2e-126 Identities = 1160/1747 (66%), Gaps = 43/1747 (2%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| |||||||||||| |||||| ||| | |||||| || | | |||| Sbjct 87188 TAGTACATGCCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTG 87247 Query 78259 GCCAGACTCGGGTTCTC-CATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACC 78317 ||| | ||| || | |||| ||||||||| ||||| |||||||||||| | ||||| Sbjct 87248 CCCATCGT-GGGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACC 87306 Query 78318 GCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAAT 78377 |||||| || | ||| | | | || | | || | | ||||||| |||| ||| | Sbjct 87307 GCGGTCAGCAGACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAA 87366 Query 78378 GGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGCTCGCACAATT 78435 ||||| | || || ||||| | | | ||| | | | ||| || |||| Sbjct 87367 AGCCTTGATATCGGCCGGGATG--CTGGGGATGTTCTGGATAGAACCATCTTCGGCAATG 87424 Query 78436 TCA---TTCTTAATT---TGAGGGTTCCAGCGATTGATCTTCTGA-AGATCCCGGA---- 78484 | ||||| || | || ||| || |||| ||| || |||| || Sbjct 87425 ATACGGTTCTTCATAGCCTCAGA---CCACAGACCAATCT-CTGTCAGGTCCCTGAGTAG 87480 Query 78485 CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGG 78544 ||||| |||| | | ||||||||| || || || ||| |||||||||| | Sbjct 87481 CCAGG----GGTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAG 87536 Query 78545 TCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCA 78604 ||||| |||||||| ||||||||| |||| ||||| | || || ||||| |||| Sbjct 87537 AGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCA 87596 Query 78605 TGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCC-- 78662 |||| || | || | || || | ||| ||| |||||||| |||| | | Sbjct 87597 TGGGCGCCATCAACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCAT 87656 Query 78663 ----GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGG 78718 |||||||| ||| | | || ||||||||||| |||||| |||| | Sbjct 87657 CCCAGTCCCAAAGATCAGAAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCG 87716 Query 78719 ACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACT 78778 | | || || |||| | | |||| ||| | || || ||||||||| ||||| ||| Sbjct 87717 AGACGGGGGATCCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACG 87776 Query 78779 CGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGG 78838 | || || |||||||| | | ||||||||| ||||| |||| ||| |||| | Sbjct 87777 CAGTCAAAGCAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAG 87836 Query 78839 TCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAG 78898 || || | | || ||| || |||| ||||||| || |||||||| || | | Sbjct 87837 GGGACTCAAATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACAC 87896 Query 78899 CGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGAT 78958 | || || | ||| ||||||||||| || ||| ||| ||||| ||| || Sbjct 87897 CAATGGGCCTGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACAT 87956 Query 78959 CGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAAT 79018 | |||| ||||||||| || |||||| | || ||||||| | | ||| | Sbjct 87957 CAATGATCTTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGT 88016 Query 79019 CAAAA---TGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATG----CCAGGTTGCAC 79071 | | ||| | | | | || | | |||| ||| ||| |||||||||| Sbjct 88017 TGTAGCAGTTGTTTTCGTAG-TCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAG 88075 Query 79072 ACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTG 79131 || ||| ||| || || | | ||||||||| || ||||||| || || | Sbjct 88076 ACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGG 88135 Query 79132 ATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTAC 79191 ||||| || | |||||||||||||||||| ||| ||||| ||||||||| |||| | Sbjct 88136 ATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAA 88195 Query 79192 GGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACA 79251 || | |||||||| ||| || ||| | | ||| ||| | | | | ||| | Sbjct 88196 GGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATG 88255 Query 79252 ACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCA 79311 ||| | || || | | ||||| || ||||| | | ||| | || || Sbjct 88256 GTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCG 88315 Query 79312 TAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTC 79371 ||| || | ||||| |||||||||| |||||||| ||| |||||| ||| |||| Sbjct 88316 TAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTC 88375 Query 79372 TCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGC 79431 |||||| || |||||||||||| || ||||| || || ||||||||||||| || Sbjct 88376 TCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGG 88435 Query 79432 ATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCAC 79491 | |||||| | || |||||| |||| ||||| || || | || || |||||||| Sbjct 88436 ACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCAT 88495 Query 79492 GGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGG 79551 |||||||| ||||| ||||| | ||| ||||| || ||||||| ||||| ||| Sbjct 88496 GGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGG 88555 Query 79552 GCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCG 79611 || ||||||||||| || || |||||||| | ||| |||| | |||||| || ||| Sbjct 88556 GCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCG 88615 Query 79612 TTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 ||| | || | || || || | | || || | || || || |||| | Sbjct 88616 GCGATGTAAGAGCCAGTGGCACGGATACGGTGGA--CGTTCAGACCAATACCTCCGGCCA 88673 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 ||||||||| ||||| |||||| || |||||||| || || || ||| |||| Sbjct 88674 TCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCT 88733 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| |||| |||||||| ||||| ||| || | | |||||| || ||||| || | Sbjct 88734 TCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTG 88793 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 | |||| |||||||||||||| || || |||||| | ||||||||| | || | | Sbjct 88794 TAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCT 88853 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCGC 79909 | || || || ||| || || || || ||||||| | || ||| ||| ||| Sbjct 88854 CAATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGA 88913 Query 79910 CGACATT 79916 |||| || Sbjct 88914 CGACTTT 88920 Score = 425 bits (470), Expect = 6e-114 Identities = 1150/1744 (66%), Gaps = 47/1744 (3%) Strand=Plus/Minus Query 19102 GCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGT 19161 ||| ||| || | ||||||| || || || || ||| || || || | | |||| Sbjct 88906 GCCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATTGAGAGAGT 88847 Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 ||||| ||| |||||||| || || |||||||||||||| |||| || || || Sbjct 88846 TATTGAGACGTACAACCTGATGTCGCACAAATTCTTCACGCACGCATCGCCTACACTGTT 88787 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 ||| || |||||| | | || ||| ||||| || ||||| || | ||||||||||| Sbjct 88786 CAATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGACATGAAGGATGA 88727 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 ||| ||||| || |||||||| || |||||| ||||| ||||||||| | |||| Sbjct 88726 CAGTATTGAAGGTATCTACGATACTCTCAAGACTTGCGCCATGATCTCCAAGATGGCCGG 88667 Query 19342 GGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 ||||| || | || | |||||| | | ||| | ||| || || || Sbjct 88666 AGGTATTGGTCTGAACGTCCACCGTATCCGTGCCACTGGCTCTTACATCGCCGGTACCAA 88607 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 ||| | |||||||| | || ||||| || |||||||||||||| ||| | ||||| Sbjct 88606 CGGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACGT 88547 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 ||||||| || || || || | ||||| |||||||| |||||||||||||| Sbjct 88546 TGACCAGGGTGGTAATAAGCGTCCTGGTGCTTTCGCTATCTACCTGGAGCCATGGCACGC 88487 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || ||| | || |||||||| |||| |||||| ||| | |||||| | || || Sbjct 88486 TGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCCCG 88427 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 |||||||||| || | |||||||| ||||| |||||| || |||||||||| ||| Sbjct 88426 CGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGAACGG 88367 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || ||| ||| |||||||| |||| ||||||||||| | ||| |||||| || | Sbjct 88366 CGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGA 88307 Query 19702 GTTCAATGAGTTGTACCGGACTTAC------GTAGCCCAGGGCCGGTTCAAGAAGGTGGT 19755 |||| | | ||||| || ||| | || || ||||| ||||| || Sbjct 88306 GTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGCCG---CAAGACCATG-- 88252 Query 19756 CCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815 ||| | | | | ||| || | ||||| | |||| ||||||||||| || | Sbjct 88251 -AAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCTTT 88193 Query 19816 CATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAA 19875 |||| ||||||||| ||| ||| |||| || ||||||||| | || | ||| Sbjct 88192 CATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCCG 88133 Query 19876 GTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTG 19935 ||||||||||| || || ||||| ||| | || || ||| || || || Sbjct 88132 CAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCTG 88073 Query 19936 TAATCTGGCGTCC----CTGTGCCTGCCGACTTT--CGTCAAGGCCTCCTCCTTCGACTT 19989 || ||||| ||| || |||| || | || | | | | || || | |||| Sbjct 88072 CAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGCTACAACTT 88013 Query 19990 TGCCA--AATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGAT 20047 ||| | | ||||||| |||| |||||| || || ||||| |||| ||| Sbjct 88012 --CCAGCACCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACCTGAACAAGATCATTGAT 87955 Query 20048 CGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCG 20107 ||| ||||| ||| ||| ||| || ||||| ||| |||| || | Sbjct 87954 GTCAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGT 87895 Query 20108 ATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC 20167 | || |||||||| || ||||| | ||| || ||| || | |||| || || Sbjct 87894 GTTGGTGTCCAGGGTCTTGCCGATGCCTTCTTGGCTCTCCGCATGCCATTTGAGTCCCCT 87835 Query 20168 AAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAA 20227 |||| ||| |||| ||||| ||||||||| || | |||||||| || | | Sbjct 87834 GAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCACGCTGCTTTGACTGCG 87775 Query 20228 TCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCC 20287 || ||||| ||||||| | |||||||| ||| |||| | | |||| || |||| || Sbjct 87774 TCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCCCCCGTCTCG 87715 Query 20288 GAGGGTATCCTCCAGCCGGACATGTGGGGCGTC------ACTGAGAATGAGTTTTGGAGC 20341 |||| || || ||||||||||||||| |||| | | ||| Sbjct 87714 CAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTTTGGGACTGGGAT 87655 Query 20342 GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401 || | |||| |||||||| ||||| | || ||| ||| | | ||||||||| Sbjct 87654 GCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCGCCCATG 87595 Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACC 20461 || ||||| || || | ||||| |||| ||||||||| |||||||| ||||| | Sbjct 87594 CCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCT 87535 Query 20462 AACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGG-- 20519 ||||||||| ||| ||| || || || |||||| || ||| ||| | ||||| Sbjct 87534 AACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTC--CA-GGTCGTCAA-CCCCTGGCT 87479 Query 20520 --TCCGCGACTTG-CAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA---TGAAATTG 20573 || | ||| || ||| |||| | | ||||||| || ||||| | |||| Sbjct 87478 ACTCAGGGACCTGACAG-AGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATCATTG 87420 Query 20574 TCCGAGCCGGCGGGAGCGTCCAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTT 20630 |||| | || ||||| ||| ||||| | |||||| | | Sbjct 87419 -CCGA--AGATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGT 87363 Query 20631 ACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCG 20690 ||| |||||| |||||| || | |||| || || | | ||| | || || ||||| | Sbjct 87362 ACAAGACCGTCTGGGAAGTCTCTCAGAGGACGATTGTGCAGATGTCTGCTGACCGCGGTG 87303 Query 20691 CCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGC 20750 ||| |||||||||||| ||||| ||||| || |||| | || | ||| ||| Sbjct 87302 CCTTCATCGACCAGTCGCAGTCTCTCAACATCCACATGCGTGAGCCCACGATGGGCAAGA 87243 Query 20751 TGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGC 20810 | | |||||| | ||||||| | ||| |||||||| ||||||||||| || | Sbjct 87242 TCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAGACTGGCATGTACTACCTCC 87183 Query 20811 GGAC 20814 | || Sbjct 87182 GCAC 87179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521543134000