Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq14 313 3e-80
seq35 152 6e-32
>seq14
Length=442650
Score = 313 bits (346), Expect = 3e-80
Identities = 492/700 (70%), Gaps = 6/700 (1%)
Strand=Plus/Minus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
|||||||||| || | ||| || || | ||| |||||||| |||| || ||||||||
Sbjct 88843 TGAGACGTACAACCTGATGTCGCACAAATTCTTCACGCACGCATCGCCTACACTGTTCAA 88784
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
||||||||| || |||||| ||||| |||||||| || | ||||||||||||
Sbjct 88783 TGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGACATGAAGGATGACAG 88724
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
|| || || |||||||| || |||||| || ||| ||||||||| | | || ||
Sbjct 88723 TATTGAAGGTATCTACGATACTCTCAAGACTTGCGCCATGATCTCCAAGATGGCCGGAGG 88664
Query 53422 TATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479
||| ||| | || || | ||| |||||| | ||| | ||| || || |||
Sbjct 88663 TATTGGTCTGAACG--TCCACCGTATCCGTGCCACTGGCTCTTACATCGCCGGTACCAAC 88606
Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539
||| | | || ||| | || ||||| || |||||||||||||| ||||| |||||
Sbjct 88605 GGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACGTT 88546
Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599
||||||||||| ||||| || | ||||| |||||||| ||||| ||||||||
Sbjct 88545 GACCAGGGTGGTAATAAGCGTCCTGGTGCTTTCGCTATCTACCTGGAGCCATGGCACGCT 88486
Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659
|| | | ||||| ||||| |||| ||| || ||| | || ||| | || |||
Sbjct 88485 GATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCCCGC 88426
Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719
||||| || ||||| |||||||| |||||||||||| | ||| |||||| |||
Sbjct 88425 GACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGAACGGC 88366
Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGA 53778
|| ||| ||| |||||||| ||||||||||| |||| | | | || ||||||||| ||
Sbjct 88365 GACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTG-CTACGGTGACGA 88307
Query 53779 GTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGC 53838
||| | | |||| || ||||| | |||||| | |||| | |||||
Sbjct 88306 GTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGCCGCAAGACCATGAAGGC 88247
Query 53839 GCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTG 53898
| || | ||| | || |||||| || |||| ||||| || | || | ||||
Sbjct 88246 TCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCTTTCATGCT 88187
Query 53899 CTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||||||| | |||| ||||||||||||||||||
Sbjct 88186 CTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAAC 88147
Score = 105 bits (116), Expect = 7e-18
Identities = 295/437 (68%), Gaps = 23/437 (5%)
Strand=Plus/Minus
Query 55500 TGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGC 55559
||||||| ||||| ||||| || || | ||||| |||||||||||||| |||||||
Sbjct 87605 TGGCGCCCATGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGC 87546
Query 55560 CGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACA 55619
| ||||| | |||||||||| ||| || || || || ||||| || | || ||
Sbjct 87545 CATACACCTCTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTC--CAGG-TCGTCA 87489
Query 55620 AGCAC---CTCGTCAAGGACCTG-CAGAAGATCAACAAGTGGAACCCGCAGATCAAGA-- 55673
| | | || ||| ||||||| |||| ||| |||| | || ||||
Sbjct 87488 ACCCCTGGCTACTCAGGGACCTGACAGA-GATTGGTCTGTGGTCTGAGGCTATGAAGAAC 87430
Query 55674 CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCTCTGCG-TCTCA 55730
|| || | ||| ||| | || || ||||||| || || ||| || | |||
Sbjct 87429 CGTATCAT-TGCCGAA-GATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCA 87372
Query 55731 AGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTG---ACATGAGTG 55787
||| | ||| ||| || ||||| | | |||| || ||||| | ||| ||
Sbjct 87371 AGGCTTTGTACAAGACCGTCTGGGAAGTCTCTCAGAGGAC---GATTGTGCAGATGTCTG 87315
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
|||| || ||||| | |||||||||||| |||||||| |||||| |||| | ||
Sbjct 87314 CTGACCGCGGTGCCTTCATCGACCAGTCGCAGTCTCTCAACATCCACATGCGTGAGCCCA 87255
Query 55848 CACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| |||| | | || | |||||||| ||| |||||| ||| |||||||| ||
Sbjct 87254 CGATGGGCAAGATCA-CTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAGACTGGC 87196
Query 55907 ATGTACTATCTGCGGAC 55923
|||||||| || || ||
Sbjct 87195 ATGTACTACCTCCGCAC 87179
>seq35
Length=278380
Score = 152 bits (168), Expect = 6e-32
Identities = 202/280 (72%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 117302 CGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAAT 117361
|| || ||||||||||||| ||| |||| ||| | ||||| |||||||| | ||||||
Sbjct 230226 CGGGTAAAAATGTAACGAGCGCTGGCAGAATCGCTACCACCCGCAAGACGAGAACCGAAG 230167
Query 117362 TGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTG 117421
| || || || |||| || || | |||||| | ||| ||||||||||| ||||||
Sbjct 230166 TTACCGCTGGGTTCCAGGATATTTATGTTGTTCGAGCCTACAAAGTTTTGGGCCAAGCCA 230107
Query 117422 ACAATCGTACCTTG----GAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCAC 117477
| ||||| || ||| || ||||| ||||| || || ||||| || | |
Sbjct 230106 ATGATCGTTTGCTGCAAAGAGACT----TCACCGTGGTGGTAAGCTGTCTGTTCGGAGAT 230051
Query 117478 GTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATA 117537
||| || |||| || | | |||||| ||||| |||| ||| ||||| |||||| ||
Sbjct 230050 GTAACCGGCCAACTCAACGACCTTCTTGTCTTTGGTCAAGTTACGCTTGAAGCAGGCGTA 229991
Query 117538 AATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACG 117577
||| || || | ||||| ||| |||||||| ||| | |||
Sbjct 229990 AATGACTTTCCTCTGACCTGGTTTCAGACCGTCCACAACG 229951
Score = 147 bits (162), Expect = 2e-30
Identities = 224/319 (70%), Gaps = 0/319 (0%)
Strand=Plus/Minus
Query 151998 GAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCATC 152057
||| ||||||| | | |||| |||||| || || ||||| || | |||||| | |||
Sbjct 230254 GAAAATCCGTCTGGCGAAAGGAGACAAACGGGTAAAAATGTAACGAGCGCTGGCAGAATC 230195
Query 152058 CTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTT 152117
| ||||| || || || | || || | || ||| || |||| || | ||||||
Sbjct 230194 GCTACCACCCGCAAGACGAGAACCGAAGTTACCGCTGGGTTCCAGGATATTTATGTTGTT 230135
Query 152118 GGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTG 152177
| ||| || || || || ||||| | ||||| ||||| | ||||||||||
Sbjct 230134 CGAGCCTACAAAGTTTTGGGCCAAGCCAATGATCGTTTGCTGCAAAGAGACTTCACCGTG 230075
Query 152178 GTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGT 152237
||| || || ||||| || | |||||| || ||||||| | |||||| |||| | ||
Sbjct 230074 GTGGTAAGCTGTCTGTTCGGAGATGTAACCGGCCAACTCAACGACCTTCTTGTCTTTGGT 230015
Query 152238 CAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCCAC 152297
|| ||| ||||| ||||||||||| || || | ||| |||||||| |||||||||
Sbjct 230014 CAAGTTACGCTTGAAGCAGGCGTAAATGACTTTCCTCTGACCTGGTTTCAGACCGTCCAC 229955
Query 152298 CACGTGAGGAATCGAACGC 152316
||| ||||| || |||
Sbjct 229954 AACGGATGGAATGGATCGC 229936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212750905000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |