Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq14 333 3e-86 seq4 167 3e-36 seq80 163 3e-35 seq5 122 1e-22 seq88 107 2e-18 >seq14 Length=442650 Score = 333 bits (368), Expect = 3e-86 Identities = 932/1415 (66%), Gaps = 28/1415 (2%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || || || || ||| | || | ||| | ||||| ||||| || |||| Sbjct 87500 AACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCG 87559 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||||| || || ||||| | ||| || || ||||| || | | ||||| || Sbjct 87560 TTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTGTTT 87619 Query 80476 CGCAGGCCGTGCTTCTTGATATCCTCGCGCAAA---TCTGA---CCAAAAATCAACCCCA 80529 || | ||||||| |||||| | | |||| || | ||||| |||| | Sbjct 87620 CGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG----A 87675 Query 80530 ACGCTGTGAC--CCCACATGTCGTGCTGCAAGATG-CCCTCCGACGCCGGAGACCCCGCG 80586 | |||| ||| |||||||||| | || ||| || |||| ||| | || || ||| || Sbjct 87676 AGGCTG-GACGCCCCACATGTCATATTG-AAGCTGTCCCTGCGAGACGGGGGATCCCTCG 87733 Query 80587 AACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGA 80646 | |||| ||| ||||| || |||||| | || || ||| | | | || ||||| Sbjct 87734 TATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGG 87793 Query 80647 TAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAG 80706 || ||| ||| |||| ||||||| ||| |||| ||| || || | || | Sbjct 87794 TAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGCATG 87853 Query 80707 CCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGC 80766 | | || ||| | || || || ||||| || || | | || || | ||| ||| Sbjct 87854 CGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 87913 Query 80767 TTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAG 80825 |||| | | | | |||||| | ||||| ||| ||| |||| |||||| Sbjct 87914 ATGTTGCTGTTG-TATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAG 87972 Query 80826 GTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCC 80882 |||||| ||| ||| | || || || || || | ||| |||| | | | ||| | Sbjct 87973 GTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTC 88032 Query 80883 CT--TCA-CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGC 80939 | ||| || |||| || || | ||| ||||| ||||| || |||||||| |||| Sbjct 88033 GTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGG 88092 Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999 | | |||||| ||| || ||||||| || || || || |||||||| || Sbjct 88093 AGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTT 88152 Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059 |||||| |||| |||||| || ||||||||| |||| | ||| | ||||||||| Sbjct 88153 CTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGT 88212 Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCC 81119 ||| | || ||||||||||| ||| | || | ||||| | ||||||| ||| Sbjct 88213 CTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCC 88272 Query 81120 TTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGT 81178 ||| | | ||||| |||| | ||||||| | |||||| | || |||| ||| Sbjct 88273 TTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAG-TCAGCAAGGC 88331 Query 81179 CTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGA 81238 | ||||||||||| |||||||| ||| ||||||| || ||||| || |||||||| Sbjct 88332 CAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGA 88391 Query 81239 AAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCT 81298 | |||||| |||||||| || ||| ||||||||| || ||||||| | ||| | Sbjct 88392 AGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGT 88451 Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358 |||| ||||| ||||| || || | || || || |||||||||||||| || | | Sbjct 88452 GGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAG 88511 Query 81359 CGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415 ||| | || || | |||||||||| |||||||||||||| ||| || | Sbjct 88512 CGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGA 88571 Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475 |||| | ||| || |||||||| | |||| ||||| ||||| |||| || || Sbjct 88572 CACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAG 88631 Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535 |||| || | | || ||||| || || || | | ||| || ||| || | Sbjct 88632 TGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGC 88691 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595 | || | || || || || || || || || || | |||||||| | | ||| | Sbjct 88692 AAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGC 88751 Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655 | |||| |||||| | || |||||||||||||| || | ||||| ||| Sbjct 88752 ACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGA 88811 Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAA 81715 | | || |||||||||| || || || | || | |||||| || || | Sbjct 88812 AGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGA 88871 Query 81716 TACCGATAGCTACACGCATAAACATGTACTGGGGC 81750 |||| | ||| |||||||| | ||||| ||| ||| Sbjct 88872 TACCAACAGCAACACGCATGATCATGTGCTGTGGC 88906 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || || || ||||||||||| |||||||| ||| |||||||||| | |||| Sbjct 87173 GCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGC 87232 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || | ||| ||| | | ||||| | |||| |||||| |||||||| ||||| Sbjct 87233 ATGCTAGTGATCTTGCCCATCGTGGGCTCACGCATGTGGATGTTGAGAGACTGCGACTGG 87292 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211 |||||| || || || || || | ||| | | ||| | | | || | | |||||| Sbjct 87293 TCGATGAAGGCACCGCGGTCAGCAGACATCTGCACAATCGTCCTCTGAGAGACTTCCCAG 87352 Query 80212 ACTGT 80216 || || Sbjct 87353 ACGGT 87357 >seq4 Length=784365 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || |||||||| || ||||||||||| ||||| Sbjct 47164 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 47105 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||| || || || |||||| Sbjct 47104 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 47045 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||| | |||||| || | ||||| || Sbjct 47044 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGTCGTACTCTGTCCGACTACAAC 46985 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || | || | || ||||| ||||| Sbjct 46984 ATTCAGAAGGAGTCTACTCTCCACTTGGTTCTCCGCCTTCGTGGTGG 46938 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 47392 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 47333 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || |||||||||||||||||||| ||||| |||||| Sbjct 47332 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGACCAG 47273 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||| | || ||||| | ||||| || Sbjct 47272 CAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 47213 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| || ||| | ||||| || || || Sbjct 47212 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGCGG 47166 Score = 145 bits (160), Expect = 9e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || || || || || || ||||| ||||| Sbjct 46936 ATGCAGATCTTCGTCAAGACATTGACGGGAAAAACGATAACACTAGAGGTGGAGTCCTCA 46877 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || ||||| || || ||||||||||||||||| || ||||||||| Sbjct 46876 GACACCATTGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 46817 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| | || |||| || || || | ||||| ||| Sbjct 46816 CAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGGACGCTGTCTGACTACAAT 46757 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || || | || | ||||| || |||||||| Sbjct 46756 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGTCTGCGTGGTGGACA 46707 >seq80 Length=149332 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || || ||||| || || |||||||| ||||| Sbjct 52682 ATCATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACCCTTGAGGTGGAGTCC 52741 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | ||| | ||| | || ||||||||||||||||| || || || ||| Sbjct 52742 TCGGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGAC 52801 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||| |||||||| | |||||||| | ||||| Sbjct 52802 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTAC 52861 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| ||||| || || ||||| || || ||||| Sbjct 52862 AACATCCAGAAGGAGAGCACCCTTCACCTCGTGTTGCGCCTCCGTGGTGG 52911 >seq5 Length=773751 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 717440 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 717499 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||| || || || ||||||||||| | Sbjct 717500 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGATT 717559 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| | ||||| || |||| || Sbjct 717560 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 717619 Query 27594 GG 27595 || Sbjct 717620 GG 717621 >seq88 Length=140259 Score = 107 bits (118), Expect = 2e-18 Identities = 329/502 (66%), Gaps = 15/502 (3%) Strand=Plus/Minus Query 64662 TAAAAAGGCTGAATGGGCCATCCGGTGGATGA---ATCGTGGGTCGTCGTTTGGTCAGCG 64718 ||| ||||| || |||||| | |||||| | | | | ||| | | | |||||| Sbjct 57396 TAAGAAGGCCGACTGGGCCCTGAAGTGGATCACGGACCACGAGTCTACCTACGCTCAGCG 57337 Query 64719 TCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTT 64778 ||| | || || || ||| || || || ||||| || | ||| || || || Sbjct 57336 TCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTT 57277 Query 64779 CTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCG 64838 |||||| || ||||| || ||||||| |||||| | || || ||||||||||||||||| Sbjct 57276 CTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCTCTCG 57217 Query 64839 GGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGA-CAA 64895 |||||||| || ||| || || || || || |||||| ||||| | | | | Sbjct 57216 TGACGAGGGTCTGCACACTGACTT--CGCTTGCCTGCTGTTCTCTCACCTGAGGAACCGC 57159 Query 64896 ACCATCACATGGGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATT 64955 ||| || | | | | | | || | | || || | ||||| ||||| || Sbjct 57158 CCCAGCA-AGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGAGAAGGAGTT 57100 Query 64956 CATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTA 65015 | | || | || ||||| || |||| |||||||| | ||| | |||||| ||||| Sbjct 57099 CTTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGATGAAGCAGTA 57040 Query 65016 TATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTA---TTAAGCCCTACTGGAA 65072 ||||| || || || || || || ||| |||| | ||| |||| || Sbjct 57039 CATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGTCTAC---AA 56983 Query 65073 TTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTT 65132 ||| | || || || |||| ||||||| ||| ||| | || ||||| ||||| || Sbjct 56982 GTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTT 56923 Query 65133 TGAAAAGAGGGTAGGTGATTAC 65154 || ||| | || ||||| ||| Sbjct 56922 CGAGAAGCGTGTCGGTGACTAC 56901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307013782000