Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 4e-20
>seq4
Length=784365
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || |||||| | || |||||||| || || | |||
Sbjct 47164 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 47105
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| || ||||| || ||||| ||
Sbjct 47104 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 47045
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||||| || || | || ||| || || | ||||| ||||||
Sbjct 47044 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGTCGTACTCTGTCCGACTACAAC 46985
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | || |||||| | || | || ||||| ||
Sbjct 46984 ATTCAGAAGGAGTCTACTCTCCACTTGGTTCTCCGCCTTCGTGGTGGTAT 46935
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || || | || || || || ||||| | ||
Sbjct 46936 ATGCAGATCTTCGTCAAGACATTGACGGGAAAAACGATAACACTAGAGGTGGAGTCCTCA 46877
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || || || ||||| || ||
Sbjct 46876 GACACCATTGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 46817
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || |||||||| | ||| | || || |||||
Sbjct 46816 CAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGGACGCTGTCTGACTACAAT 46757
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | || ||||| | ||| |||| |||||
Sbjct 46756 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGTCTGCGTGGTGG 46710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915817672000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |