Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 6e-18
>seq2
Length=950389
Score = 105 bits (116), Expect = 6e-18
Identities = 234/343 (68%), Gaps = 10/343 (3%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|| || |||||||| || || || | | || |||| ||| ||||| || ||||||
Sbjct 623447 CCCCTCCTGACGACCAAGCGCGTCTTCCACCGGGCCGTGCTCGCCGAGCTCCTCTGGTTC 623506
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342
|| || || || ||| | ||| ||| | ||| || |||||||||||||
Sbjct 623507 GTCAGCGGCGCGACGTCGTCGCTCTCGCTGTCGGAGCAGGGCGTCAAGATCTGGGACGGC 623566
Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGG-GGGTTC--CCATCTCGGGAGGAGGGCGAC 34399
|||| || || || || || |||| ||| ||| || ||| | || ||| ||||||
Sbjct 623567 AACGGCTCGCGCGAGTTCCTCGACA-GCGTCGGGCTCGGCCACCGCG--AGGCCGGCGAC 623623
Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA--TCGGGGGAGCG 34457
||||||| || ||||||||||||||| | ||||| || || ||||| || | | ||
Sbjct 623624 CTGGGCCCCGTGTACGGGTTCCAGTGGCGCCACTTCGGCGCCGAGTACGTC-GACGCCCG 623682
Query 34458 AAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGC 34517
| | ||||| |||| ||||| | ||||||||| | || || ||| || |
Sbjct 623683 CA-CCGACTACACGGGCCAGGGCGTCGACCAGCTGGCCGAGGTCGTCCACAAGCTGCGGA 623741
Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560
|||||| | ||| | | ||| | ||| |||||||||||||
Sbjct 623742 CGAACCCGTACGACCGCCGCATCATCATGAGCGCGTGGAACCC 623784
Score = 105 bits (116), Expect = 6e-18
Identities = 234/343 (68%), Gaps = 10/343 (3%)
Strand=Plus/Minus
Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844
||||||||||||| ||| | ||| | | ||| | |||||| | || ||| ||
Sbjct 623784 GGGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGTGGACG 623725
Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGA--TACT 6902
|| | ||||||||| | ||||| |||| ||||| | | || | | || ||||
Sbjct 623724 ACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGG-TGCGGGCGTC-GACGTACT 623667
Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962
| || || ||||| | ||||||||||||||| || ||||||| |||||| ||| || |
Sbjct 623666 CGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCT--CGCG 623609
Query 6963 ATGG--GAACCC-CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019
||| || ||| ||| |||| || || || || || |||| ||||||||||||| |
Sbjct 623608 GTGGCCGAGCCCGACGC-TGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 623550
Query 7020 CCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079
| ||| | ||| ||| | ||| || || || |||||||| || |||||
Sbjct 623549 CGCCCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGGAGCTCGG 623490
Query 7080 CGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
||| |||| || | | || || || |||||||| || ||
Sbjct 623489 CGAGCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGG 623447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448259738442000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |