Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq80 93.3 4e-14
seq4 89.7 4e-13
>seq80
Length=149332
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| ||||| | || || |||||||| || || || || || |||| || || || |
Sbjct 52900 GCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCC 52841
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
||| || ||||| ||||| || || || || ||||||||||||| ||| | || ||| ||
Sbjct 52840 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 52781
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| || || |||| | | | || || |||||||| || | |||||
Sbjct 52780 GTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGAT 52721
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || ||||| || || || || ||||| |||||
Sbjct 52720 GGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 52685
>seq4
Length=784365
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || || ||| || || || || || |||| || || || |||| ||
Sbjct 46956 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCGTCCTCG 47015
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || ||||| || || ||||||||||||| ||| | || ||| |||||| |
Sbjct 47016 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 47075
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || |||| | | | || ||| ||||| || || | ||||| | ||
Sbjct 47076 ATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 47135
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || || ||||||||||||||
Sbjct 47136 CCAGTGAGGGTCTTGACAAAGATTTGCAT 47164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543113333675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |