Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 2e-24
seq26 82.4 6e-11
>seq2
Length=950389
Score = 127 bits (140), Expect = 2e-24
Identities = 239/349 (68%), Gaps = 2/349 (1%)
Strand=Plus/Minus
Query 27375 CAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 27434
|||||| ||||||||| |||| || ||||||||| | ||| | ||||| ||| |
Sbjct 623794 CAAGTCGGCGGGGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAG 623735
Query 27435 GAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTC 27494
|| ||| | | |||||| || || ||| |||| |||||| | |||
Sbjct 623734 CTTGTGGACGACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTC 623675
Query 27495 CGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTC 27554
|||||| || ||||| || | ||| |||||||||||||| || |||||||| || |
Sbjct 623674 GACGTACTCGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGC 623615
Query 27555 TTCCCTGTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGA 27613
|| | ||| ||| |||| | |||| | || || | || |||||| |||||||||
Sbjct 623614 CTCGCGGTGGCCGA-GCCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGA 623556
Query 27614 TCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCA 27673
|||| || |||| ||| || ||| || || | || ||||||||||| || |
Sbjct 623555 TCTTGACGCCCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGGA 623496
Query 27674 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
|||| | | |||||| ||||| | ||||||||| ||||||||
Sbjct 623495 GCTCGGCGAGCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGG 623447
>seq26
Length=307012
Score = 82.4 bits (90), Expect = 6e-11
Identities = 131/181 (72%), Gaps = 8/181 (4%)
Strand=Plus/Plus
Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568
||||||||| | | | ||| ||| | |||| |||| ||||||||||| || || |
Sbjct 123534 CGTCAAGGTCCGTGTCCGTACCACCAAGATCCCACAGATTGGTGACAAGTTCGCATCTCG 123593
Query 48569 TCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCCTTCGA 48626
|||||| || ||||| || ||| | | || ||| ||||| |||||||| ||| |
Sbjct 123594 TCACGGT-CAGAAGGGCACTATTGGTGTCA--CTTACCGTCAGGAAGACATGCCGTTC-A 123649
Query 48627 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 48685
| | || || || ||||||| | |||||||||||||||||| |||| || | ||||
Sbjct 123650 CTCGCGAGGGTGTCACGCCCGACATTATCATCAACCCCCACGCCATTCCATCGCGTATGA 123709
Query 48686 C 48686
|
Sbjct 123710 C 123710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369505060899725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |