Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq52 93.3 4e-14 >seq52 Length=836814 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||||||| ||||| || ||||||||||||||||| ||||| Sbjct 426957 GTTGCCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTC 426898 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || || | |||| ||||| || || || || | || || | ||||||||| Sbjct 426897 GCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGG 426838 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | ||| ||||| | || Sbjct 426837 TGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTC 426778 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||||||||||||||||| | || || || || || ||||| Sbjct 426777 GACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 86.0 bits (94), Expect = 5e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || || || ||||| | || ||| || | |||||||||||||||||| Sbjct 426467 GTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGTTTGCCC 426408 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | ||| ||||| || | ||| |||||||| |||||| || Sbjct 426407 GCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 426348 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTA 21153 || | | ||| || || | || ||| || | ||| ||||||||||| |||| Sbjct 426347 ACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTTA 426293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422255818891412