Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq482 149 6e-31 seq52 131 2e-25 seq519 84.2 2e-11 seq430 84.2 2e-11 >seq482 Length=325002 Score = 149 bits (164), Expect = 6e-31 Identities = 203/283 (72%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||| |||||||| |||||| ||| ||||||||||| | ||| ||| | || || Sbjct 233900 ATCTGGCGTATGTACAAGAAGGCCATGGCCTCGTTCTGGACTGCCGAAGAGATCGATCTC 233841 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| || | |||||| | ||| | ||||| |||| ||| |||||| Sbjct 233840 TCCAAAGATGTGCCAGACTGGAACAACCGCCTCAACGATGACGAACGCTTCTTCATCTCC 233781 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || ||||| || || ||||| |||||||||||||| | ||||| Sbjct 233780 CACATTCTCGCATTCTTCGCAGCATCGGATGGCATTGTCAACGAGAATCTCCTTGAGCGA 233721 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||||| | || || || ||||||||||| || |||||||| ||| Sbjct 233720 TTCAGCAATGAGGTCCAGGTTCCAGAAGCTCGATGCTTCTACGGTTTCCAGATCGCTATG 233661 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGT 116915 |||||| | ||||| || | || || ||| || || |||| Sbjct 233660 GAGAACATTCACTCCGAGACATACTCCCTCCTGATTGAGACGT 233618 Score = 127 bits (140), Expect = 2e-24 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 117037 GCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCAT 117096 ||| || || ||||| || |||||||||||| ||||||| || |||||| |||| Sbjct 233444 GCGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCAT 233385 Query 117097 ATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTC 117156 || ||||||||||| ||||| |||||||||||| |||| ||| ||||||||||||||| Sbjct 233384 CTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTC 233325 Query 117157 CAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 | | || ||||| |||| ||| || ||||| Sbjct 233324 CCGCGATGAGGGCATGCACACCGATTTCGCCTG 233292 >seq52 Length=836814 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | ||||| || |||||||| | || || ||| || | Sbjct 426499 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACCATCACATTGGAGGTTGAATCCTCA 426558 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| ||||| | ||||||||||| || || ||||||| Sbjct 426559 GACACCATCGACAACG-TCAAGACCAAAATCCAGGACAAAGAGGGTATTCCACCGGACCA 426617 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| ||| || || || || || |||| |||||||| ||||||||| Sbjct 426618 ACAGCGACTTATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCCTGTCCGACTACAA 426677 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || ||||| Sbjct 426678 CATCCAGAAGGAATCAACTCTGCA 426701 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||| || |||| |||||| | || Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| ||| |||| ||||| || || ||||| | ||||| Sbjct 426787 GATACGATCGACAACG-TCAAGACAAAGATTCAGGACAAGGAAGGAATCCCACCAGACCA 426845 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || || ||||| |||| || || | | ||||||||| Sbjct 426846 GCAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGACGTACGTTGAGCGACTACAA 426905 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| || |||||| | || |||| Sbjct 426906 CATTCAAAAGGAGTCGACATTGCA 426929 Score = 113 bits (124), Expect = 5e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| |||| || || ||| ||||| | | | |||| ||||| Sbjct 426295 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACG-TCAAGAC 426353 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||||||||| | ||||| || || | |||| |||||||| Sbjct 426354 CAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGCAA 426413 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| || | || ||| | ||||||||| |||||||||||| | || || || Sbjct 426414 ACAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCTACACTCCA 426473 Query 40893 TCTAGT 40898 || || Sbjct 426474 CCTTGT 426479 >seq519 Length=112231 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| ||||| ||||| || || |||||||| | || |||||| | | |||| | Sbjct 63375 TTCGTCAAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATC 63316 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | || ||||| || ||||| | ||||| || || || Sbjct 63315 GACAATGTCAAGACTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGCTG 63256 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || |||||||| || | || ||| | | ||||||||||| || ||| Sbjct 63255 ATCTTCGCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAAAG 63196 Query 40879 G 40879 | Sbjct 63195 G 63195 >seq430 Length=527729 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || || || ||| | |||||||| || | |||| ||| ||||| ||||| || Sbjct 369360 GACAAGGAAGGAATTCCCCCAGACCAGCAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAG 369419 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| || ||||| ||||||||||||||| |||||| | || || || || || Sbjct 369420 GACGGACGAACCCTATCCGACTACAACATCCAAAAGGAGTCGACACTTCACCTCGT 369475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214968762320