Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq52 131 1e-25 >seq52 Length=836814 Score = 131 bits (144), Expect = 1e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | ||| ||||| |||||||||||||| ||||||| || || || || Sbjct 426936 CACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTC 426877 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || ||||| ||| ||||||| |||||||| || || || || || |||||||| Sbjct 426876 CAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTG 426817 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| ||| || || | |||| || || | || | ||||| |||| || | || | Sbjct 426816 AATCTTTGTCTTGACGTTGTCGATCGTATCGGATGAT-TCGACTTCGAGTGTAATGGTCT 426758 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| ||||| || || ||||||||||| Sbjct 426757 TGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||||||||| || || || ||||| ||| || || || |||||| ||||| Sbjct 426474 GTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTG 426415 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||| || || |||| | |||||| || || || || ||||||||||||||| || || Sbjct 426414 TTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTT 426355 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| || ||| ||||||| ||| | || ||||| || Sbjct 426354 GGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 426295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433826926238644