Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq52 122 1e-22 >seq52 Length=836814 Score = 122 bits (134), Expect = 1e-22 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| |||||||| |||||||||||| ||||| || || || || | Sbjct 426942 ACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCC 426883 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || ||||| ||||| ||||||||||| | || | | ||||| Sbjct 426882 GTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTT 426823 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 |||| ||| | ||||| |||| ||| | | | ||| ||| ||||| || |||| || Sbjct 426822 GTCC-TGAATCTTTGTCTTGA-CGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTA 426765 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| ||||| || || ||||| || || || ||||| Sbjct 426764 ATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571812903947960