Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq52 134 9e-27 >seq52 Length=836814 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| ||| || || || || || |||||||||||| | Sbjct 426953 CCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTC 426894 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | ||| |||| |||| ||||| |||||||| ||||| ||||||||||| || Sbjct 426893 AACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 426834 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| |||||| ||| | | | | |||| ||||| |||||||| Sbjct 426833 ATTCCTTCCTTGTCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGACT 426774 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| |||||||||||||| ||||| || |||||||| Sbjct 426773 TCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | | |||| ||| | ||| ||| ||||| ||||||||||||||| Sbjct 426725 CCACCGCGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 426666 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||| || ||||| || || ||||| ||||| || Sbjct 426665 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGA 426606 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | ||| ||||| || ||||| ||| | | | | || | || | ||||| | Sbjct 426605 ATACCCTCTTTGTC--CTGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAA 426548 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| || || || | || || || ||||||||||| Sbjct 426547 CCTCCAATGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069413101920