Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq115 98.7 2e-15 >seq115 Length=330173 Score = 98.7 bits (108), Expect = 2e-15 Identities = 253/371 (68%), Gaps = 22/371 (6%) Strand=Plus/Plus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 ||| || ||| |||| ||||| || ||| || | ||| | | ||||| |||||||||| Sbjct 101133 CTGAACTCCGCTATTGTCTACGACAGAGACTTCAATTACCAATACTTTGGTTTCAAAACG 101192 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 || ||| |||||| || ||| || |||||| ||| || || || || ||| Sbjct 101193 CTCGAGCGATCGTACCTGCTCCGGATAAGCGGCAAGGTCGCTGAGCGTCCACAACATATG 101252 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC--TCGAGACGT 248959 | ||||| || ||||| ||||||||| ||| || || ||| || ||| || |||| | Sbjct 101253 ATCATGCGCGTAGCTGTTGGGATTCACGGGGAGGATATTGAG-GC-TGCTATCCAGACAT 101310 Query 248960 ACACCGGAATGAGTGAAC-GCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGT 249018 ||| | ||| |||| | | ||||| ||| | || ||||| || || || || Sbjct 101311 ACAACTACATG-TCGAACAAATACTTTACACACGCCTCGCCCACGCTTTTTAATGCAGGC 101369 Query 249019 AC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTT--GCCATGC--AAGACGACTCTG 249073 || | ||||| | ||||| ||||| ||| |||| | | || | |||| ||| Sbjct 101370 ACACCTCAACCA-CAGCT---CTCGT-CTTGCTTCCTCATCGATACAAAAGAGGACAGCA 101424 Query 249074 TCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCG 249130 | || || ||||| ||||| |||| |||| |||| |||||| || ||| |||| Sbjct 101425 TTGAGGGTATTTACGACACCCTTA---AGACTTGTGCGATGATTTCGAAGACCGCTGGCG 101481 Query 249131 GAATCGGTCTC 249141 | || |||||| Sbjct 101482 GTATTGGTCTC 101492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073757361235776