Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq115 93.3 8e-14 seq482 91.5 3e-13 >seq115 Length=330173 Score = 93.3 bits (102), Expect = 8e-14 Identities = 172/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||| || || || || |||||| || || ||||||||||||||| Sbjct 101482 CCGCCAGCGGTCTTCGAAATCATCGCACAAGTCTTAAGGGTGTCGTAAATACCCTCAATG 101423 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCACA 94910 || || |||| | | |||||||| || || || || ||| ||| ||| || Sbjct 101422 CTGTCCTCTTTTGTATCGATGAGGAAGCAAGACGAGAGCTGTGGT-TGAGGTGTGCCTGC 101364 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 |||||| || ||||| || || || ||||| || | |||||||| | ||||| | Sbjct 101363 ATTAAAAAGCGTGGGCGAGGCGTGTGTAAAGTATTTGTTCGACATGTAGTTGTATGTCTG 101304 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 || ||| | || || |||||||| || ||||| || ||||| ||||| | || Sbjct 101303 GATAGCAGCCTCAATATCCTCCCCGTGAATCCCAACAGCTACGCGCATGATCATATGTTG 101244 Query 95031 AGGGCGCTCA 95040 || |||||| Sbjct 101243 TGGACGCTCA 101234 >seq482 Length=325002 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || |||||||| || || || || |||||||| || ||||| ||||||||||| |||||| Sbjct 233437 GTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCATCTTCTGG 233378 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030 ||||||| | ||| | |||| || | |||| |||||| ||| |||| || Sbjct 233377 CTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTC 233325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989575669867435