Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq482 104 3e-17 seq115 84.2 3e-11 >seq482 Length=325002 Score = 104 bits (114), Expect = 3e-17 Identities = 328/504 (65%), Gaps = 11/504 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 || ||||| ||||||||||| || ||||| ||||| || ||||| | | || ||||| Sbjct 233001 TTCTGGTAGTCACCCACACGCTTCTCGAAGAAATTCGTCTTTCCGGCGAGGGAAATATTC 233060 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTC-AGAAAT 49787 |||||||| ||||| || ||| | |||| |||| || | || | | || | | Sbjct 233061 TCCATGAAGTCAAAAGGGTTGACAGCATTGTAAACCTTGACATTGCCAAGCGCGAGCAGT 233120 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 49847 | | ||| || ||||| || || ||| ||| | | | | ||||| || | || Sbjct 233121 AGA-CGATCAGCAACAAACTCAATGTATTGGCACATAAGTCCCGAGTTCATGCCGAGCAG 233179 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 | | ||| |||||| | | | || || || || || ||| || || || || || Sbjct 233180 TCTGCATGGTAGAGCCTCGCTCAAGAACTCCTGCTCGATTTGTACTGCCTCAGTAATGAT 233239 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGC 49964 || | |||| ||||| || || | | | ||| || | | || || Sbjct 233240 AGCGCGGACGG---CTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAAAGGAGGCAGGC 233296 Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024 ||||||| ||||| ||||| || | || || |||||||| || || | ||||| Sbjct 233297 GAAATCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGG 233356 Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCC 50084 ||| || || ||||| || ||||| || ||||| || || | || |||||||| || Sbjct 233357 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAAGATGCC 233416 Query 50085 TTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---GTATCCA 50141 || || ||||||||||| || || | | | | | | | |||||| ||||| Sbjct 233417 CTCGACGGCGGCAAAGGCGACGAGACGCGACGCGAAGGTAGAGTTGTCATCGCAAATCCA 233476 Query 50142 CTTTTGAGCCCAATCGGCCTTCTT 50165 ||| ||||| ||||||||||| Sbjct 233477 CTTCAATGCCCAGTCGGCCTTCTT 233500 >seq115 Length=330173 Score = 84.2 bits (92), Expect = 3e-11 Identities = 361/565 (64%), Gaps = 7/565 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| || ||||| || || |||| | || || ||||||||||| || || || | | Sbjct 103050 GTGAACTGGATGGGGGCTGAGGCGGCCATTGTTCGGAGATAGTACATGCCGGTCTTCAAA 102991 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || ||| ||||| ||| | ||| | || ||| || Sbjct 102990 CCCATCTTCCAACCAGCGAAGTGCATGGACGTGATCTTGCCCATGGTGGGCTCTTTCATG 102931 Query 78838 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 ||||| |||| || | ||| |||||| || || || || | ||| || ||||| |||| Sbjct 102930 TGGATGTTCA-AGCTCTGAGATTGATCAATAAACGCACCGCGGTCGGCGGCCATGGTTAT 102872 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 ||| || || || ||||| | || || || | || || || || || | Sbjct 102871 GATGGTACGCTGACTGATCTCCCAGACGGTCTTGTACAGGGCTTTGATGTCATCAGGGAT 102812 Query 78957 GTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | |||| || ||||| ||||| || || || || | |||||| || | ||| Sbjct 102811 GTTGGGTATATTTTGGATGGAGCCACCTTCAGCAATGATGCGATTCTTCATGTTGTCAGA 102752 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | ||||| | | | | || || || ||||| || || || ||||| Sbjct 102751 CCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTAACGACCTGGAACTCTCC 102692 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || | |||| |||| ||| || || || ||||| || | | ||||| || Sbjct 102691 AGCAAGCACTCGACGAGAGTAGATGTTCGACGTGTATGGCTCGAAGCACTCATTGAAACC 102632 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAAC-TATTTCTAAGAC 79192 | ||| |||| || || || || |||||||| | || ||| || | ||| | | || Sbjct 102631 GAGAATCTGAGATGTGGAAGCAGTCGGCATAGGAG-CAACAAGAAGCGAATTGCGGACAC 102573 Query 79193 CGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| |||| | | | || || || ||||| ||||| ||||||| || || | Sbjct 102572 CGTGCCTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAGATCAGTGGGTGTGACGT 102513 Query 79253 TCCAAAGATCATATTGTAGAATACC 79277 |||| | || || || ||||| || Sbjct 102512 TCCACATGTCGTACTGGAGAATGCC 102488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262901217480