Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq115 86.0 8e-12 >seq115 Length=330173 Score = 86.0 bits (94), Expect = 8e-12 Identities = 294/458 (64%), Gaps = 3/458 (1%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || ||||| ||||| | || ||||| | || || |||||||||||||| || || | | Sbjct 103050 GTGAACTGGATGGGGGCTGAGGCGGCCATTGTTCGGAGATAGTACATGCCGGTCTTCAAA 102991 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || | |||| || || ||||| ||| | ||| | | || || ||| Sbjct 102990 CCCATCTTCCAACCAGCGAAGTGCATGGACGTGATCTTGCCCATGGTGGGCTCTTTCATG 102931 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || |||| |||| |||||| || || || || | ||| || ||||| ||||| Sbjct 102930 TGGATGTTCAAGCTCTGAGATTGATCAATAAACGCACCGCGGTCGGCGGCCATGGTTATG 102871 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 || || || || ||||| | || || || | || || || || || | | Sbjct 102870 ATGGTACGCTGACTGATCTCCCAGACGGTCTTGTACAGGGCTTTGATGTCATCAGGGATG 102811 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 || | |||| || ||||| ||||| || ||||| || | ||| || || | ||| | Sbjct 102810 TTGGGTATATTTTGGATGGAGCCACCTTCAGCAATGATGCGATTCTTCATGTTGTCAGAC 102751 Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157 || | ||||| | | | | || || || ||||| || || || |||||| Sbjct 102750 CAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTAACGACCTGGAACTCTCCA 102691 Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217 | | |||| ||||| ||| || || || || || || | ||||||| || Sbjct 102690 GCAAGCACTCGACGAGAGTAGATGTTCGACGTGTATGGCTCGAAGCACTCATTGAAACCG 102631 Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255 | ||| |||| || || |||||||||||||| || || Sbjct 102630 AGAATCTGAGATGTGGAAGCAGTCGGCATAGGAGCAAC 102593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671133688269320