Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq52 86.0 4e-12 >seq52 Length=836814 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 |||||| |||||||||||||| ||||| || ||||| || ||| | || ||| || Sbjct 426936 CACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTC 426877 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 || ||||||||| || || | || |||||||| | || || ||||| || || Sbjct 426876 CAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTG 426817 Query 33280 AATCGCCTGT-TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTT 33338 |||| ||| || || | | ||||| ||| | || || || || || || || | Sbjct 426816 AATC-TTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCT 426758 Query 33339 TTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | || || ||||| || |||||||| ||||| Sbjct 426757 TGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318775047487986