Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq52 98.7 8e-16 >seq52 Length=836814 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 || ||| || || | ||| |||||||||||||||||| || ||| || |||| Sbjct 426939 TAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTC 426880 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||||| ||||| || || | || | |||||||| || || | | ||||||||| Sbjct 426879 TTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTC 426820 Query 48634 CATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 | ||| || ||||| | | || || ||||||| || || |||| ||| ||| Sbjct 426819 CTGAATCTTTGTCTTGACGTTGTCG--ATCGTATCGGATGATTCGACTTCGAGTGTAATG 426762 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||||||||| ||||| ||||||||||| Sbjct 426761 GTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247826962657