Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq501 114 2e-21 seq526 95.1 2e-15 >seq501 Length=520086 Score = 114 bits (126), Expect = 2e-21 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||| |||||| |||||| | |||| |||| |||| Sbjct 304019 TGATCTACGAAGAGACCCGTGGTGTCCTGAAGACGTTCCTCGAATCCGTCATCCGGGATG 303960 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | | ||| ||||||||||| || |||||||| || ||||| | ||| ||||||||| Sbjct 303959 CCGTTACCTACACCGAGCACGCAAAGCGTAAGACCGTTACCTCGCTCGATGTCGTCTATG 303900 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 | ||||| | |||||||||| | || ||||| ||| |||| Sbjct 303899 CTTTGAAGAGACAAGGCCGTACCCTCTACGGTTTCGGAGGTTA 303857 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| |||| |||| || || || ||||||||||| ||||| || ||||| || Sbjct 304181 GCTAAGCGTCACCGCAAGATC-CTCCGTGACAACATCCAAGGTATCACGAAACCAGCCAT 304123 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| || || ||||||||||| || ||||||||| | |||| Sbjct 304122 CCGACGACTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 304082 >seq526 Length=188824 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||| || || ||||||||||| ||||||||||| || || Sbjct 11001 GCCAAGCGCCACCGAAAGAT-TCTCCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 10943 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 || ||||| |||||||||||||| ||||||||| |||| Sbjct 10942 TCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 10904 Score = 82.4 bits (90), Expect = 1e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| |||| |||||| ||| | || | || ||| |||| Sbjct 10845 TGATCTACGAGGAGACCCGTGGTGTTCTGAAGACTTTCTTGGAGTCTGTCATCAGGGATG 10786 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || || || |||||||| || || |||||||||||||| | || | ||||| | Sbjct 10785 CTGTCACATACACTGAGCACGCCAAGCGAAAGACTGTCACCTCTCTCGACGTGGTCTACG 10726 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | || || |||||||| | | || |||||||| |||| Sbjct 10725 CCCTCAAGCGACAAGGCCGCACCTTGTACGGTTTTGGTGGTTA 10683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074599300301