Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq115 163 7e-35 seq482 98.7 3e-15 >seq115 Length=330173 Score = 163 bits (180), Expect = 7e-35 Identities = 426/637 (67%), Gaps = 16/637 (3%) Strand=Plus/Plus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 ||| || || || |||||| | ||||| || ||| |||| || || | |||| |||| Sbjct 101234 TGAGCGTCCACAACATATGATCATGCGCGTAGCTGTTGGGATTCACGGGGAGGATATTGA 101293 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCA 363564 || || || | ||||| || || | | || | | || || || |||||| |||| Sbjct 101294 GGCTGCTATCCAGACATACAA-CTAC-ATGTCGAACAAATACTTTACACACGCCTCGCCC 101351 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 || | | ||||| || || | | | |||||| | || |||||||| || | | | Sbjct 101352 ACGCTTTTTAATGCAGGCACACCTCAACCACAGCTCTCGTCTTGCTTCCTCATCGATACA 101411 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 || || || ||| |||||||| | ||||| ||||||| |||||| | ||||| ||| Sbjct 101412 AAAGAGGACAGCATTGAGGGTATTTACGACACCCTTAAGACTTGTGCGATGATTTCGAAG 101471 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA--CAGAACAGTTACATTC 363742 | || ||||| |||||| | | ||| | | | || | || || |||||| Sbjct 101472 ACCGCTGGCGGTATTGGTCTCAATGTGCACCGTATCAGAGCCACCGGATCA--TACATTG 101529 Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 | || ||| || || || ||||| ||||||||||| ||||| || ||| |||| Sbjct 101530 GAGGAACAAACGGCACATCAAACGGGCTTGTTCCCATGCTCCGTGTCTTCGACGCGACTG 101589 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | |||||||| || |||||| ||||| || || ||||| || || ||||||| Sbjct 101590 CTCGCTACGTCGATCAAGGTGGAAACAAGCGTCCTGGTGCATTTGCCATTTACCTCGAGC 101649 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAA--AAGAGG 363919 | || || ||| | | | | | || || | || || ||||| || |||||| Sbjct 101650 CATGGCACGCAGATGTCATCAACTGGTTGGATCTGAGAAAGAACCACGGCAAAGAAGAGG 101709 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 | ||||| || ||||| |||||||| | ||| || | |||| || |||||||| | Sbjct 101710 CA---CGTGCTCGCGATCTTTTCTATGCCTTGTGGATTCCCGACCTATTCATGAAGCGAG 101766 Query 363980 TGGAGGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 | || ||| | | ||| | || | ||||| |||||||| || || || |||| Sbjct 101767 TCGA-ACAGAACGGCGAGTGGACGCTGATGTGCCCTCACGAATGCCCTGGACTCGCCGAC 101825 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075 | | || ||||| | || ||||| ||||| |||| Sbjct 101826 ATTTATGGCGACGAGTTTGAGGCTCTCTACGAGAAGT 101862 Score = 98.7 bits (108), Expect = 3e-15 Identities = 345/539 (64%), Gaps = 0/539 (0%) Strand=Plus/Plus Query 364618 TATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCA 364677 || || || || || |||| || || | |||||| || | ||||| ||||| || Sbjct 102464 TACGAAGGCTCACCCGTTTCCCAAGGCATTCTCCAGTACGACATGTGGAACGTCACACCC 102523 Query 364678 TCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC 364737 ||| | ||| ||||||| |||| | | | |||| ||| ||| ||||| Sbjct 102524 ACTGATCTCTGGGACTGGGACTCGCTCAAGGCTGATATCAAGAGGCACGGTGTCCGCAAT 102583 Query 364738 TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAG 364797 || || || || || ||||| || ||||| || | ||||| ||||| ||| ||| Sbjct 102584 TCGCTTCTTGTTGCTCCTATGCCGACTGCTTCCACATCTCAGATTCTCGGTTTCAATGAG 102643 Query 364798 TGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCG 364857 |||||||| || | || || | || || || || || ||| | ||||| || | | Sbjct 102644 TGCTTCGAGCCATACACGTCGAACATCTACTCTCGTCGAGTGCTTGCTGGAGAGTTCCAG 102703 Query 364858 GTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATG 364917 || ||||| | ||| |||||||||| ||| || || ||| ||||| |||| Sbjct 102704 GTCGTTAACCCATGGCTACTCAAGGATCTCGTCGAGATGGGTCTCTGGTCTGACAACATG 102763 Query 364918 AAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGAT 364977 ||||| ||||| || | ||| || | || || || || | || || || Sbjct 102764 AAGAATCGCATCATTGCTGAAGGTGGCTCCATCCAAAATATACCCAACATCCCTGATGAC 102823 Query 364978 CTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCG 365037 | || | | ||||| ||||| ||||| || ||| || |||| ||||| Sbjct 102824 ATCAAAGCCCTGTACAAGACCGTCTGGGAGATCAGTCAGCGTACCATCATAACCATGGCC 102883 Query 365038 GCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCA 365097 ||||| |||||||| ||||| ||| ||| || ||| | ||||| |||| Sbjct 102884 GCCGACCGCGGTGCGTTTATTGATCAATCTCAGAGCTTGAACATCCACATGAAAGAGCCC 102943 Query 365098 ACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||| | |||| | || |||||||| ||| || ||||| ||| | ||||| || Sbjct 102944 ACCATGGGCAAGATCACGTCCATGCACTTCGCTGGTTGGAAGATGGGTTTGAAGACCGG 103002 >seq482 Length=325002 Score = 98.7 bits (108), Expect = 3e-15 Identities = 336/519 (65%), Gaps = 6/519 (1%) Strand=Plus/Minus Query 22437 GAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGA--ACGTT-CATTCGCGGAACG 22493 ||| ||||| || ||||| |||| ||||| | |||| || | | |||||| || Sbjct 233501 GAAGAAGGCCGACTGGGCATTGAAGTGGATTTGCGATGACAACTCTACCTTCGCGTCGCG 233442 Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553 ||| | || ||||| | || || ||||| ||||| || || || | ||||| Sbjct 233441 TCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCATCTT 233382 Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613 ||||| || || || | | ||||| || | || || || || ||| | || ||| Sbjct 233381 CTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTCCCG 233322 Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAA 22673 |||||||| | || |||||||| || || | || | || | || ||| | || Sbjct 233321 CGATGAGGGCATGCACACCGATTTCGCCTGCCTCCTTT-TCTCA--CAGCTCAACAAGAA 233265 Query 22674 ACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATT 22733 | | | |||| | || | | ||| ||||| | ||||| || | || | || Sbjct 233264 GCCTTCGCCTGAAGCCGTCCGCGCTATCATTACTGAGGCAGTACAAATCGAGCAGGAGTT 233205 Query 22734 TATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATA 22793 | ||||||| ||||| || || | || || || | | | ||| | ||| Sbjct 233204 CTTGAGCGAGGCTCTACCATGCAGACTGCTCGGCATGAACTCGGGACTTATGTGCCAATA 233145 Query 22794 TATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGT 22853 ||| | |||||||| ||||||||| | | | || || ||| ||| ||| || | Sbjct 233144 CATTGAGTTTGTTGCTGATCGTCTACTGCTCGCGCTTGGCAATGTCAAGGTTTACAATGC 233085 Query 22854 CGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGA 22913 || || || ||||| | ||||| |||||| || | |||||||| ||||||||||| Sbjct 233084 TGTCAACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGGAAAGACGAATTTCTTCGA 233025 Query 22914 AAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952 || | || ||||| ||||| || || || || ||||| Sbjct 233024 GAAGCGTGTGGGTGACTACCAGAAGGCTGGCGTGATGGA 232986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342628613774