Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq52 163 3e-35 seq115 131 2e-25 seq482 113 4e-20 seq430 107 2e-18 seq519 104 2e-17 >seq52 Length=836814 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| ||||| || || | ||||||||||||||||||||||| ||||| Sbjct 426954 GCCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCT 426895 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||| || || ||||| |||||| |||| | ||||||||||| || || Sbjct 426894 CAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGG 426835 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||| ||||| ||| | | || ||||| | || | ||||||| || |||| Sbjct 426834 GATTCCTTCCTTGTCC-TGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGA 426776 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || ||||| ||||| || |||||||||||||| Sbjct 426775 CTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 >seq115 Length=330173 Score = 131 bits (144), Expect = 2e-25 Identities = 282/422 (67%), Gaps = 0/422 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||||||| ||||| || || | ||| ||||| | || | ||| |||||| | || Sbjct 102711 TTAACGACCTGGAACTCTCCAGCAAGCACTCGACGAGAGTAGATGTTCGACGTGTATGGC 102652 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || || || || |||| || | || || ||||| || || Sbjct 102651 TCGAAGCACTCATTGAAACCGAGAATCTGAGATGTGGAAGCAGTCGGCATAGGAGCAACA 102592 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | |||||||| | |||||| ||||||| || |||| |||| |||| ||||| Sbjct 102591 AGAAGCGAATTGCGGACACCGTGCCTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAG 102532 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||| || | |||| ||||||||||||||| | |||||| | | |||| | Sbjct 102531 AGATCAGTGGGTGTGACGTTCCACATGTCGTACTGGAGAATGCCTTGGGAAACGGGTGAG 102472 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 |||| |||| |||| | ||| || ||||||| ||| || ||||||| Sbjct 102471 CCTTCGTAGGACTTGTATGTACCCTCCTCTTGCGCGAGCTTGCAGGACGAGGTCAGAGCG 102412 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 || ||| ||||||||| ||||| |||||||| | |||||| |||| | Sbjct 102411 GCGTGATAGATTGTCTCGAAGATTTGAATGTTGAGCTTTTTTGCTTCAGGAGACTCGAAG 102352 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 || | || ||| | |||||||| || || ||||| | || || |||| || ||| Sbjct 102351 GGTAGACGGAGCGCAAGGAAAGCATCAGCAAGACCCTGCACACCGACACCGACTGGACGA 102292 Query 145478 TG 145479 || Sbjct 102291 TG 102290 >seq482 Length=325002 Score = 113 bits (124), Expect = 4e-20 Identities = 342/516 (66%), Gaps = 17/516 (3%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | || ||||| |||||||||| |||||||||| | || | | || Sbjct 233512 CCTTGCATCCGGAAGAAGGCCGACTGGGCATTGAAGTGGATTTGCGATGACAACTCTACC 233453 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||||| |||| | || |||||||| || |||||| |||| || || ||| Sbjct 233452 TTCGCGTCGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTC 233393 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 || ||||||| | |||| || | || | ||||||||||| |||| || |||||| Sbjct 233392 GCATCCATCTTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGCTTGACCTTCTCCAACGA 233334 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTC 46324 ||| || || ||||| |||||| |||| || || || || || || || | | ||| Sbjct 233333 GCTCATCTCCCGCGATGAGGGCATGCACACCGATTTCGCCTGCCTCCTTTTCTCACA--- 233277 Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGC-ATGTTCAAGGAGGCGGTGGCC 46383 || | || | |||| | |||| || |||| | | || || | | ||||| || Sbjct 233276 GC-TCAACAAGAAGCCTTCGCCTGAAGCCGT-CCGCGCTATCATTACTGAGGCAGTACAA 233219 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCC-CGCTGCCCTGCTGGGCATGAACGCACA 46442 || ||| ||||||| || | | || || || || | ||||| ||||||||| | Sbjct 233218 ATCGAGCAGGAGTTCTTGAGCGAGGCTCTACCATGCAG-ACTGCTCGGCATGAACTCGGG 233160 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCG---ACTGCTCGTGCAGCTTCACCA 46499 |||||| | ||||| |||||||| || || || |||||||| |||| | | Sbjct 233159 ACTTATGTGCCAATACATTGAGTTTGTTGCTGATCGTCTACTGCTCG---CGCTTGGCAA 233103 Query 46500 GCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGG 46559 ||| || | || ||| || ||||| || ||| | || || ||||| | || Sbjct 233102 TGTCAAGGTTTACAATGCTGTCAACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGG 233043 Query 46560 CAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || ||||| ||||| ||||| || || || || Sbjct 233042 AAAGACGAATTTCTTCGAGAAGCGTGTGGGTGACTA 233007 >seq430 Length=527729 Score = 107 bits (118), Expect = 2e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 |||||||||||||| |||||||| ||| | ||| || |||||| |||||||||||| Sbjct 369463 GTCGACTCCTTTTGGATGTTGTAGTCGGATAGGGTTCGTCCGTCCTCGAGCTGCTTGCCT 369404 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 ||| |||| || ||||||||||| || || |||||||| ||||| || Sbjct 369403 GCGAAGATCAAGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTGT 369357 >seq519 Length=112231 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||||||||||||||| || |||| ||| || ||||| |||||||| || ||| ||| Sbjct 63195 CCTTTTGAATGTTGTAGTCACTCAAGGTACGTCCATCCTCCAGCTGCTTTCCGGCGAAGA 63254 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||| ||||| || |||||||||||||| || ||| || ||||| | | Sbjct 63255 TCAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTGT 63314 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | || |||| || | || | ||| || ||||| || ||||| |||| Sbjct 63315 CGATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGACGA 63374 Query 131225 AA 131226 || Sbjct 63375 AA 63376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008923594880