Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq52 105 5e-18 >seq52 Length=836814 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786 |||| ||||| || || ||||| || ||||||||||||| || ||| | ||||||| Sbjct 426707 ACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCG 426648 Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGC 16845 | ||| || || || | ||||| |||||||||||| || | |||||||||| | | Sbjct 426647 AGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGAATACCCTCTTTGTCCTGG 426588 Query 16846 AATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTT 16905 | |||| | ||| || | | | | ||||| || || |||| |||||||| || Sbjct 426587 ATTTTGGT-CTTGACGTTGTCGATGGTGTCTGAGGATTCAACCTCCAATGTGATGGTCTT 426529 Query 16906 TCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || |||| ||| ||||| || |||||||| Sbjct 426528 ACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || || |||||||||| || ||| | | ||||||| ||| Sbjct 426473 TGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGT 426414 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC-GGCAATTTG 16851 ||||||||| | || | ||||||||||| || | |||||| ||||| | | ||| Sbjct 426413 TTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTG 426354 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | | ||||||| || ||| || | ||||||||| || || || Sbjct 426353 GT-CTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 426295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084756384430