Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq425 140 2e-28 seq52 102 5e-17 >seq425 Length=2277 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1220 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1279 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1280 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1314 >seq52 Length=836814 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| || ||||| || ||||| ||||| || || ||||| || | Sbjct 426727 TACCACCGCGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGG 426668 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| || |||| || | ||| ||||| || || || || || ||||| || | | Sbjct 426667 ACAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTG 426608 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||||||| ||||| ||| || || | || || ||| ||||| Sbjct 426607 GAATACCCTCTTTGTCCTGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAA 426548 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || ||||| || || ||||||||||| || || ||||| |||||||| Sbjct 426547 CCTCCAATGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | |||||| || | || |||||||||||| ||||| || ||| |||| | Sbjct 426942 ACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCC 426883 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || | ||| ||||| || || || ||||| || || || | |||| ||||| || Sbjct 426882 GTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTT 426823 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 |||| ||| ||| ||| || || | || ||||| ||| ||||| | |||||| Sbjct 426822 GTCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAAT 426763 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || | || |||||||| |||||||| Sbjct 426762 GGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944518014967