Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq52 116 3e-21 seq519 91.5 1e-13 >seq52 Length=836814 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| |||||||| | || || || || || Sbjct 426499 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACCATCACATTGGAGGTTGAATCCTCA 426558 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| |||||||| || |||||||| |||||| Sbjct 426559 GACACCATCGACAACGTCAAGACCAAAATCCAGGACAAAGAGGGTATTCCACCGGACCAA 426618 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || ||| | || || | ||||| || ||| ||||| Sbjct 426619 CAGCGACTTATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCCTGTCCGACTACAAC 426678 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || || ||||| || || || || || Sbjct 426679 ATCCAGAAGGAATCAACTCTGCACTTGGT 426707 >seq519 Length=112231 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 ||||| || ||||||| | || || || ||||||||||| ||||| || || ||| Sbjct 63360 ACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATCGA--CAATGTCAAGA 63303 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| || |||||||| || ||||| |||||||||||| | || || ||||| | Sbjct 63302 CTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGCTGATCTTCGCCGGAA 63243 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 | || | || |||| || || || | || ||||| |||||||| Sbjct 63242 AGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAAA 63197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324530261455