Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-14 seq525 89.7 1e-12 >seq2 Length=850095 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || || || || ||||||||||| ||||| || || ||| |||| ||||| | || Sbjct 45227 AGTTGGCTCCCTCTCTGGTGGTTGGAAAATGAAACTTGCGCTCGCTCGTGCCATGTTGCT 45168 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGA 279799 ||| ||||||||||| ||||||| |||||||| || ||| |||| Sbjct 45167 GCGCGCCGATGTCCTCTTGCTTGACGAGCCAACTAATCACTTGGA 45123 >seq525 Length=1454817 Score = 89.7 bits (98), Expect = 1e-12 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || || |||| ||||| |||||||| ||||| || |||||||| || |||| ||| || Sbjct 947270 TCCCGCATTGCCGTCATCGGACCCAACGGTGCTGGCAAGTCTACTCTCGTCAACGTCTTG 947211 Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGG 280278 ||||| || || || || ||| | ||| | | | ||||| ||||| || || | Sbjct 947210 ACTGGTGA-ACTCATTCCGACT-ACCGGTGAGCTCTACCAGCATGAGAACATCCGTATCG 947153 Query 280279 CTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACC 280338 | ||| | |||||||||||| || ||||| ||||||| || | ||| || | Sbjct 947152 CCTACATTAAACAGCACGCTTTCGCACATATCGACCACCACCTCGAGAAGACGCCATCCG 947093 Query 280339 AATACATTCAGTGGCGCTATGCAAGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 | ||||| || ||||||| || ||| |||||| ||| | ||||||| Sbjct 947092 AGTACATCCAATGGCGCTTCCAAACTGGTGAGGATCGTGAGACTATGGATCG 947041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027828147862537