Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq52 179 7e-40 seq525 86.0 1e-11 seq482 84.2 4e-11 >seq52 Length=836814 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || || |||||||| || || || || || |||||||| || ||||| Sbjct 426725 CCACCGCGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 426666 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| || ||||| || |||| |||||||| |||||| Sbjct 426665 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGA 426606 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || || || | ||||||| ||||||||||||| ||||| || Sbjct 426605 ATACCCTCTTTGTCCTGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAACC 426546 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 426545 TCCAATGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 154 bits (170), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || || || || || || | |||||||| | || ||||| ||||| ||||| || Sbjct 426959 TAGTTGCCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAG 426900 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||| | || | || ||||| | ||||| || ||||| ||||| | || ||||| Sbjct 426899 TCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCT 426840 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 ||||| || ||||||||||| |||||||||| ||||||| ||||| || || | |||| Sbjct 426839 GGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGAT 426780 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| | || ||||| || || ||||| ||||| ||||| |||||||| Sbjct 426779 TCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 113 bits (124), Expect = 8e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || ||||| || || ||||| Sbjct 426497 CCACCACGGAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGAC 426438 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | ||| || || || || || | | |||||||| ||||| Sbjct 426437 AAGGTACGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGG 426378 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| ||||||||||| ||||| | ||||||| ||||||||||| ||| || || || Sbjct 426377 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTC-GCTGGACTCAAC 426319 Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 426318 CTCGAGGGTGATGGTCTTGCCAGT 426295 >seq525 Length=1454817 Score = 86.0 bits (94), Expect = 1e-11 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 225772 GTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCA 225830 ||| | |||||| || ||||| || ||| || || | || | |||||| ||||| | Sbjct 947868 GTCCAGGTCGTGCTCGACGTAGACGGTCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGA 947926 Query 225831 GCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGA 225890 ||| |||| || || || | ||||| |||| || | ||||| || |||| || Sbjct 947927 CCTGCTCATTGTTGATGGCGCGCATGAGGGTTGTCTTTCCGGATCCGTTAGGTCCGAGGA 947986 Query 225891 GGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCAC 225950 | |||||| | | || ||||| | | ||| || |||||||| |||||| ||| Sbjct 947987 GACCGTAACGCTGACCACGCTTCAGGCGGAGAGATGTCTGATTCAGGAGAATCTTGGCAC 948046 Query 225951 CATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||||| | | ||| ||| | ||| || |||||||||||||| Sbjct 948047 CATAGGCCAAGTTGAATGTGCAGTTGCAGAGATCCTCACCCTCCTC 948092 >seq482 Length=325002 Score = 84.2 bits (92), Expect = 4e-11 Identities = 120/166 (72%), Gaps = 10/166 (6%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATC-GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681 || ||||| | || |||||||| | ||| ||| ||||| |||| ||||| |||||| Sbjct 233731 AGATTCTCGTTGACAATGCCATCCGATGC-TGCGAAGAATGCGAGAATGTGGGAGATGAA 233789 Query 10682 GTGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCT 10737 | ||| || |||||||| || || ||| |||||| |||||| | | ||| | Sbjct 233790 GAAGCGTTCGTCATCGTTGAGGCGGTTGTTC----CAGTCTGGCACATCTTTGGAGAGAT 233845 Query 10738 GGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACAT 10783 || ||| || | |||||||| | ||| | ||||||||||||||| Sbjct 233846 CGATCTCTTCGGCAGTCCAGAACGAGGCCATGGCCTTCTTGTACAT 233891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921614831176040