Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq482 201 2e-46 seq115 125 1e-23 >seq482 Length=325002 Score = 201 bits (222), Expect = 2e-46 Identities = 362/520 (70%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC-GAGAGTCCCGACGCAAC 42691 || |||||| ||||||||| |||||||| | || ||||| | || | | || | || Sbjct 233512 CCTTGCATCCGGAAGAAGGCCGACTGGGCATTGAAGTGGATTTGCGA-TGACAACTCTAC 233454 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 |||| | | || || |||||| ||||||||||||||||||||||| || || || Sbjct 233453 CTTCGCGTCGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTT 233394 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| |||||||||||||||||| || ||| || |||||||| | |||||||| |||| Sbjct 233393 CGCATCCATCTTCTGGCTCAAGAAGCGCGGTCTC-ATGCCCGGCTTGACCTTCTCCAACG 233335 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | | || ||||| |||| | || || ||||||||||| ||||| | Sbjct 233334 AGCTCATCTCCCGCGATGAGGGCATGCACACCGATTTCGCCTGCCTCCTTTTCTC---AC 233278 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| | ||||| ||| || ||||| || ||||| || ||||| || | | Sbjct 233277 AGCTCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCTATCATTACTGAGGCAGTACAAA 233218 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACC 42990 ||||| |||||||| | | || | || || ||| ||||||||||| | | Sbjct 233217 TCGAGCAGGAGTTCTTGAGCGAGGCTCTACCATGCAGACTGCTCGGCATGAACTCGGGAC 233158 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGG---TCTCA 43047 | |||||| | ||||| ||| || || || | ||| ||| | | | || | ||| Sbjct 233157 TTATGTGCCAATACATTGAGTTTGTTGCTGATCGTCTACTGCTCGCGCTTGGCAATGTCA 233098 Query 43048 GCCGCCTCTACAACACGCCGT--GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGG 43105 | |||| | || || ||| || ||||| |||||||| || || | | || Sbjct 233097 ---AGGTTTACA--ATGCTGTCAACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGG 233043 Query 43106 CAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||| || || ||||||||||| || | ||||||||| Sbjct 233042 AAAGACGAATTTCTTCGAGAAGCGTGTGGGTGACTACCAG 233003 Score = 87.8 bits (96), Expect = 3e-12 Identities = 179/261 (69%), Gaps = 9/261 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| | ||| |||||| ||||| ||||| || || Sbjct 233900 ATCTGGCGTATGTACAAGAAGGCCATGGCCTCGTTCTGGACTGCCGAAGAGATCGATCTC 233841 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415 |||| || | | | |||| | || | || | || ||||| || ||| || Sbjct 233840 TCCAAAGATGTGCCAGACTGGAACA-ACCGCCTCAACGATGACGAACGCTTCTTCATCTC 233782 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || |||||||| || || || ||||| ||||| ||||| || || || Sbjct 233781 CCACATTCTCGCATTCTTCGCAGCATCGGATGGCATTGTCAACGAGAATCT--CCTTGAG 233724 Query 42476 G--TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 |||| || ||||| ||| || || || ||||||||||| |||||||| || Sbjct 233723 CGATTCAGCAATGAGGTCCAGGTTCCAGAAGCTCGATGCTTCTACGGTTTCCAGATCGCT 233664 Query 42534 ATAGAGAACGTGCACTCTGAG 42554 || |||||| | ||||| ||| Sbjct 233663 ATGGAGAACATTCACTCCGAG 233643 >seq115 Length=330173 Score = 125 bits (138), Expect = 1e-23 Identities = 444/689 (64%), Gaps = 16/689 (2%) Strand=Plus/Minus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCA 244974 ||| || ||||| |||||| ||| | | ||| | || || ||||| ||||| Sbjct 101855 GTAGAGAGCCTCAAACTCGTCGCCATAAATGTCGGCGAGTCCAGGGCATTCGTGAGGGCA 101796 Query 244975 CATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAG 245034 ||| || ||||||||||| | | ||| | || |||||| |||||||| ||||| | Sbjct 101795 CATCAGCGTCCACTCGCCGTTCTGTTCGACTCGCTTCATGAATAGGTCGGGAATCCACAA 101736 Query 245035 GGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAA 245094 ||| | ||| || || | | | ||| || ||| |||||| ||||| ||||| Sbjct 101735 GGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGCCGTGGTTCTTTCTCAGATCCAA 101676 Query 245095 AAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTT 245154 ||| | ||| || ||||||| ||||| | ||| | || | || || || ||||| Sbjct 101675 CCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAATGGCAAATGCACCAGGACGCTT 101616 Query 245155 GTTGCCTCCCTGGTCCACCATCCTCTCGAG----CGCGTTGAAGATGCGCAGGGTAGGCA 245210 ||| || || || || | | | |||| ||||| ||||| || || | || | Sbjct 101615 GTTTCCACCTTGATCGA----CGTAGCGAGCAGTCGCGTCGAAGACACGGAGCATGGGAA 101560 Query 245211 CTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTT 245268 | | ||||| || |||||| || || ||||| | || || | ||| | | | Sbjct 101559 CAAGCCCGTTTGATGTGCCGTTTGTTCCTCCAATGTATGATCCGGTGGCTCTGATACGGT 101500 Query 245269 GCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGT 245328 || || || | || | ||||| ||| ||| || || | || || |||| | ||| Sbjct 101499 GCACATTGAGA--CCAATACCGCCAGCGGTCTTCGAAATCATCGCACAAGTCTTAAGGGT 101442 Query 245329 GTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388 ||| || ||||| ||||||||| || | | || || ||||| || || ||||| Sbjct 101441 GTCGTAAATACCCTCAATGCTGTCCTCTTTTGTATCGATGAGGAAGCAAGACGAGAGCTG 101382 Query 245389 GGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGA 245448 || | || ||| | || || || ||||| |||||| |||||||| | |||| Sbjct 101381 TGGTTGAGGTGTGCCTGCATTAAAAAGCGTGGGCGAGGCGTGTGTAAAGTATTTGTTCGA 101322 Query 245449 GAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCA 245508 | | | ||| ||||||| ||| || || | || ||||| ||| | || Sbjct 101321 CATGTAGTTGTATGTCTGGATAGCAGCCTCAATATCCTCCCCGTGAATCCCAACAGCTAC 101262 Query 245509 CCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCT--CGGGTCCCTTGAGCATGTAG 245566 | ||||| | || || || ||| | | || | || | | ||||| ||| Sbjct 101261 GCGCATGATCATATGTTGTGGACGCTC--AGCGACCTTGCCGCTTATCCGGAGCAGGTAC 101204 Query 245567 GAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 || ||||||||||| ||||| |||||||| Sbjct 101203 GATCGCTCGAGCGTTTTGAAACCAAAGTA 101175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944331444614320