Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq52 147 5e-30 seq519 111 4e-19 seq482 84.2 5e-11 >seq52 Length=836814 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || |||||| | ||| ||||||||||| | ||| |||||||||||| Sbjct 426917 TCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAG 426858 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || |||||||||||| || ||||| || || | || ||||| Sbjct 426857 ATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTGACGTTG 426798 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| ||||| |||||||| || || ||||| ||||| |||||||| ||| Sbjct 426797 TCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACG 426738 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 426737 AAAATCTGCAT 426727 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||||| || ||||| ||||| || | ||| ||||| ||||| Sbjct 426690 TTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAA 426631 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || |||||||| ||| || || ||||| ||||||||||| | || ||||| Sbjct 426630 GATAAGTCGCTGTTGGTCCGGTGGAATACCCTCTTTGTCCTGGATTTTGGTCTTGACGTT 426571 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| || || | ||||| ||||| || |||| |||||||| Sbjct 426570 GTCGATGGTGTCTGAGGATTCAACCTCCAATGTGATGGTCTTACCCGTCAACGTCTTGAC 426511 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 426510 GAAGATCTGCAT 426499 >seq519 Length=112231 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 ||||| || || ||||| | || ||||| || || | || ||||| ||||||||| Sbjct 63197 TTTTGAATGTTGTAGTCACTCAAGGTACGTCCATCCTCCAGCTGCTTTCCGGCGAAGATC 63256 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || |||||||| |||||||||||||||||||||||| || | || || || || Sbjct 63257 AGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTGTCG 63316 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || |||||| || || || ||||| ||||| ||||| || || |||||||| Sbjct 63317 ATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGACGAA 63375 >seq482 Length=325002 Score = 84.2 bits (92), Expect = 5e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 269098 GAAGCAGTTACAAA-CGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGG 269156 || ||||| ||||| ||| | |||||| | | || ||| | ||||| || |||| Sbjct 233230 GAGGCAGT-ACAAATCGAGCAGGAGTTCTTGAGCGAGGCTCTACCATGCAGACTGCTCGG 233172 Query 269157 TATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGG 269215 ||||| | | || ||| ||||| || || || || ||||||||| | || | || Sbjct 233171 CATGAACTCGGGACTTATGTGCCAATACATTGAGTTTGTTGCTGATCGTCTACTGCTCG- 233113 Query 269216 CACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTT 269275 | || || ||| || || |||||| | || || || | ||| ||||| |||| Sbjct 233112 CGCTTGGCAATGTCAAGGTTTACAATGCTGTCAACCCTTTTGACTTCATGGAGAATATTT 233053 Query 269276 CGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 | |||| ||||||||||| |||||||| |||||||| | ||||| || Sbjct 233052 CCCTCGCCGGAAAGACGAATTTCTTCGAGAAGCGTGTGGGTGACTACCA 233004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179644469890446