Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq482 113 1e-19 >seq482 Length=325002 Score = 113 bits (124), Expect = 1e-19 Identities = 176/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||| || || ||||| ||| ||| |||| ||| | |||| ||| | |||||| | Sbjct 233239 ATCATTACTGAGGCAGTACAAATCGAGCAGGAGTTCTTGAGCGAGGCTCTACCATGCAGA 233180 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | ||| ||| | || ||||| || || || || || || | Sbjct 233179 CTGCTCGGCATGAACTCGGGACTTATGTGCCAATACATTGAGTTTGTTGCTGATCGTCTA 233120 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||||||||| ||| || || ||||| | ||||| |||| ||| |||||| Sbjct 233119 CTGCTCGCGCTTGGCAATGTCAAGGTTTACAATGCTGTCAACCCTTTTGACTTCATGGAG 233060 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||||| || || || || || |||||||| |||||||| |||| || || Sbjct 233059 AATATTTCCCTCGCCGGAAAGACGAATTTCTTCGAGAAGCGTGTGGGTGACTACCAGAAG 233000 Query 243742 CCTGGTGTGATG 243753 |||| |||||| Sbjct 232999 GCTGGCGTGATG 232988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870716162950