Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq52 116 4e-21 >seq52 Length=836814 Score = 116 bits (128), Expect = 4e-21 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| |||||||| ||||| |||| || ||| || || || Sbjct 426936 CACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTC 426877 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || || ||||| ||| |||| | |||||||| || || || || || ||||||||| | Sbjct 426876 CAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCC-T 426818 Query 127024 GATTTTCTG-CTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 || | | || ||||| ||||| ||| || || | |||||||||| || | || Sbjct 426817 GAATCTTTGTCTTGACGTTGT-CGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTC 426759 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| ||||| || || ||||||||||| Sbjct 426758 TTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || |||||||| ||| || || || ||| || |||||||| || Sbjct 426467 GTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGTTTGCCC 426408 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| ||||| || || || || |||||||||||||| ||| || |||| Sbjct 426407 GCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 426348 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| |||||| | ||| || |||| ||| | || ||||| || Sbjct 426347 ACGTTG-TCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 426295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475496894949680