Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq52 111 1e-19 >seq52 Length=836814 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| | |||| || || |||||||| || || || ||||| Sbjct 426953 CCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTC 426894 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || |||| ||| ||||||||| | || | || |||||||| || || Sbjct 426893 AACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 426834 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || || ||||| ||| |||| || | || | || ||||| || ||||| Sbjct 426833 ATTCCTTCCTTGTCCTGAATCTTTGTCTTGA-CGTTGTCGATCGTATCGGATGATTCGAC 426775 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| |||| || |||||||| ||||| || || ||||| ||||| Sbjct 426774 TTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999487923720