Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq115 149 8e-31 seq482 93.3 5e-14 >seq115 Length=330173 Score = 149 bits (164), Expect = 8e-31 Identities = 696/1080 (64%), Gaps = 30/1080 (3%) Strand=Plus/Minus Query 115548 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 115607 |||| ||| |||||| |||||||| || ||||| | ||| |||||| || | || Sbjct 103027 GGCCATTGTTCGGAGATAGTACATGCCGGTCTTCAAACCCATCTTCCAACCAGCGAAGTG 102968 Query 115608 CATTGAGGACAACTTGGAGAGTGTTGGACT-TTCCATGAAGAGGTTCATACTTTGGGATT 115666 ||| || | | |||| | || ||| || || |||| || ||||| || || |||| Sbjct 102967 CATGGACGTGATCTTGCCCA-TGGTGGGCTCTTTCATGTGGATGTTCAAGCTCTGAGATT 102909 Query 115667 GATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTT 115723 |||| || || || || || || ||||| || | | | | || |||| | Sbjct 102908 GATCAATAAACGCACCGCGGTCGGCGGCCATGGTTATGA--TGGTACG-CTGACTGATCT 102852 Query 115724 CCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAG 115783 |||| || || |||| ||| || || ||||| ||||| | ||||||||||| | Sbjct 102851 CCCAGACGGTCTTGTACAGGGCTTTGATGTCATCAGGGATGTTGGGTATATTTTGGATGG 102792 Query 115784 AGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGA 115843 |||||||| | | ||| ||| |||||| | | ||||||||||| |||| || Sbjct 102791 AGCCACCTTCAGCAATGATGCGATTCTTCATGTTGTCAGACCAGAGACCCATCTCGACGA 102732 Query 115844 GATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA- 115902 |||||| | || || || || ||||| || || || || | ||| Sbjct 102731 GATCCTTGAGTAGCCATGGGTTAACGACCTGGAACTCTCCAGCAAGCACTCGACG-AGAG 102673 Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | |||||||||||| |||||||||||| ||| | || || | |||||| Sbjct 102672 TAGATGTTCGACGTGTATGGCTCGAAGCACTCATTGAAACCGAGAATCTGAGATGTGGAA 102613 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | ||||| ||||||| ||| || | | || || Sbjct 102612 GCAGTCGGCATAGGAGCAACAAGAAGCGAATTGCGGACACCGTGCCTCTTGATATCAGCC 102553 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCT-CCCCCTCCCACATATCAAACTGGAG 116081 ||||| | ||||||||| || || | || | | | |||||| || ||||||| Sbjct 102552 TTGAGCGAGTCCCAGTCCCAG-AGATCAGTGGGTGTGACGTTCCACATGTCGTACTGGAG 102494 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 || |||||||| | || || || || | | || |||| ||||| | | ||| | Sbjct 102493 AATGCCTTGGGAAACGGGTGAGCCTTCGTAGGACTTGTATGTACCCTCCTCTTGCGCGAG 102434 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 | | || || || || |||||||| |||||||| || || || || | Sbjct 102433 CTTGCAGGACGAGGTCAGAGCGGCGTGATAGATTGTCTCGAAGATTTGAATGTTGAGCTT 102374 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 || || || || || || | |||||| | || || |||| || ||||| || Sbjct 102373 TTTTGCTTCAGGAGACTCGAAGGGTAGACGGAGCGCAAGGAAAGCATCAGCAAGACCCTG 102314 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGG 116318 ||||||| || | ||| ||||| | | | | | || | | | | || ||||| Sbjct 102313 CACACCGACACCGACTGGACGATGAC-GAGAGTTG-CTGTTGTATGCT-TCAGGAACGGG 102257 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 || || ||| || | | | || | |||| | ||| || || ||| || Sbjct 102256 GTAGTGGTTGACATCAATGATCTTGTTCAAATTTCGGACGACCGTCTGAACGACTTCGTG 102197 Query 116379 AAGCTTTTCGTAATCA-AAACTGCGAGT--CTCTTCATTGACATACTTAGGAAGGGCGAT 116435 | ||| | | ||||| | || || || | | ||| || | | || | || || Sbjct 102196 CAACTTGTTGAAATCATAGACGCCGCGTTGCACGTCA---ACGAAGGTCGGCAACGCCAT 102140 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 || |||| || ||||||| | |||||| ||| ||| || || || || || || Sbjct 102139 GGATGCCAAGTTGCACACAGCGACCTCATCTGGCGCAGAGTATTCGATGATCTCAGTGCA 102080 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACGCA 116553 ||| || || || ||||| ||||||||||| || || ||| ||| | || || ||| Sbjct 102079 CAAGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTT--ACTCTTGCGATTGCAAGCA 102022 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTG-AGAATAGCCTTCCA 116612 || || || |||||| | || | || ||||| || |||| |||| ||||| || | ||| Sbjct 102021 TCTTTATAAAGCATAAAAGGGTTGCCGGTCTCGGTCTGGG-CTTGTAGAATGGCGTACCA 101963 >seq482 Length=325002 Score = 93.3 bits (102), Expect = 5e-14 Identities = 336/517 (65%), Gaps = 14/517 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || |||||||||||||| || ||||| || ||||| ||||||||||| Sbjct 233006 GTAGTCACCCACACGCTTCTCGAAGAAATTCGTCTTTCCGGCGAGGGAAATATTCTCCAT 233065 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 127349 || ||||| ||||| | || ||| ||| || |||| | || |||| Sbjct 233066 GAAGTCAAAAGGGTTGACAGCATTGTAAACC-TTGACATTGCCAAGCGCGAGCAGTAGAC 233124 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 |||| | || |||||||||| | |||| | |||||||| |||| || | | Sbjct 233125 GATCAGCAACAAACTCAATGTATTGGCACATAAGTCCCGAGTTCATGCCGAGCAGTCTGC 233184 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 |||| || || || | |||| ||| ||| || | || || || | ||| ||| Sbjct 233185 ATGGTAGAGCCTCGCTCAAGAACTCCTGCTCGATTTGTACTGCCTCAGTAATGATAGCGC 233244 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAACTCT 127528 | | | || | ||| | ||| | | | | ||| || || || || Sbjct 233245 GGACGGCTTCAGGCGAAGGCTTCTTGT-TGAGCTGTGAGAAAAGGAGGCAGGCGAAATCG 233303 Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588 ||| | ||||| || ||||||||||| || || |||||| || || ||||||||| Sbjct 233304 GTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATGAGA 233363 Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 || |||||||| | |||||| || | || | || ||||||||| ||||| || Sbjct 233364 CCGCGCTTCTTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAAGATGCCCTCGACG 233423 Query 127649 CACGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGACTTTGT-ATC---AAACCACT 127703 || || || | |||||| || |||| || | |||| ||| || ||||| Sbjct 233424 GCGGCAAAGGCGACGAGACGCGACGCGAAGGTAGAG-----TTGTCATCGCAAATCCACT 233478 Query 127704 TCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| ||||| | ||||| ||| ||| || ||||| Sbjct 233479 TCAATGCCCAGTCGGCCTTCTTCCGGATGCAAGGGAC 233515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502161572120