Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq482 123 4e-23 seq115 118 2e-21 >seq482 Length=325002 Score = 123 bits (136), Expect = 4e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || |||||||| || || ||| ||||| ||||| || || ||||||| ||||||||| Sbjct 233283 AAAAGGAGGCAGGCGAAATCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAG 233342 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | | ||| ||||||| || ||| |||||||| || |||| || ||||||||| Sbjct 233343 AAGGTCAAGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGATGCGAAAGCACCG 233402 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAG 160071 || || ||||| ||||| ||||| ||||| || ||||| Sbjct 233403 CTGAAGAAGATGCCCTCGACGGCGGCAAAGGCGACGAG 233440 >seq115 Length=330173 Score = 118 bits (130), Expect = 2e-21 Identities = 446/689 (65%), Gaps = 13/689 (2%) Strand=Plus/Minus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 ||||| || || |||||||| |||| | ||| | | | ||| |||||||||||| Sbjct 103062 TCTTGATCGACAGTGAACTGGATGGGGGCTGAGGCGGCCATTGTTCGGAGATAGTACATG 103003 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||||||| | ||| ||| ||| || | ||||||||| | | |||| || | || Sbjct 103002 CCGGTCTTCAAACCCATCTTCCAACCAGCGAAGTGCATGGACGTGATCTTGCCCATGGTG 102943 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || || |||||| ||||||| ||| ||| || || ||| || || || || || Sbjct 102942 GGCTCTTTCATGTGGATGTTCAAGCTCTGAGATTGATCAAT-AAACGCACCGCGGTCGGC 102884 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 |||||| | || ||||| ||| |||||||| || |||||| ||| | || || | Sbjct 102883 GGCCATGGTTATGATGGTACGCTGACTGATCTCCCAGACGGTCTTGTACAGGGCTTTGAT 102824 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || | ||| | | | | | | ||| ||||| || || || | | || Sbjct 102823 GTCATCAGGGATGT-TGGGTATATTTTGGATGGAGCCACCTTCAGCAATGATGCGATTCT 102765 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194 || | | || ||| | |||| | || || ||| | || ||||| | || Sbjct 102764 TCATGTTGTCAGACCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTAACGA 102705 Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254 ||| || ||||| | ||||| | || | | | | ||| ||| |||| ||||| Sbjct 102704 CCTGGAACTCTCCAGCAAGCACTCGACGAGAGTAGATGTTCGACGTGTATGGCTCGAAGC 102645 Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314 ||| ||| |||| |||||||| ||| || || ||||| ||||| | || || | Sbjct 102644 ACTCATTGAAACCGAGAATCTGAGATGTGGAAGCAGTCGGCATAGGAGCAACAAGAAGCG 102585 Query 204315 AGTTGCGCACACCGT-ATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 | ||||| ||||||| | ||| | || ||| || ||| |||||| | || Sbjct 102584 AATTGCGGACACCGTGCCTCTTGATATCAGC-CTTGAGCGAGTCCCAGTCCCAGAGATCA 102526 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433 ||||| | ||| |||||||||| |||| | |||||||| || || ||| | | Sbjct 102525 GTGGGTGTGACGTTCCACATGTCGTACTGGAGAATGCCTTGGGAAACGGGTGAGCCTTCG 102466 Query 204434 TACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCA---TGGCGTGA 204490 || | | || | ||||||| || |||||||| || | || || ||||||| Sbjct 102465 TAGGACTTGTATGTACCCTCCTCTTGCGCGAGCTTGCAGGACGAGGTCAGAGCGGCGTGA 102406 Query 204491 TAGTACATGGTCTCAAAGATCTGAACGTT 204519 ||| || ||||| ||||| |||| ||| Sbjct 102405 TAG---ATTGTCTCGAAGATTTGAATGTT 102380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148669787920