Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq52 147 5e-30 seq519 127 5e-24 seq430 104 6e-17 >seq52 Length=836814 Score = 147 bits (162), Expect = 5e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 |||||||||||||| | ||||||||| ||| || | ||| |||||||| |||||||| Sbjct 426923 GTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCT 426864 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||||||||| ||||||||||| || |||||||| |||||||||||| ||| Sbjct 426863 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTG 426804 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| || || | || ||| || || | || || ||||| || |||||||| Sbjct 426803 ACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTC 426744 Query 199613 TTCACAAAAATTTG 199626 ||||| ||||| || Sbjct 426743 TTCACGAAAATCTG 426730 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||| ||||| || ||||| |||| ||||||||| | || || Sbjct 426719 CGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTG 426660 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || |||||||| |||||||| || ||||| |||||||| ||| || Sbjct 426659 CGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGAATACCC 426600 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| || || ||| ||| |||| |||||||| | ||| || ||||| Sbjct 426599 TCTTTGTCCTGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAACCTCCAAT 426540 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||||||||| | || || || || || || Sbjct 426539 GTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTG 426502 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| |||||||| | ||| || | ||||| Sbjct 426482 AGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCC 426423 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || || ||||| | |||||| ||||| || || || || || Sbjct 426422 TCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCT 426363 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 426362 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTC 426303 Query 199598 TTACCCGT 199605 || || || Sbjct 426302 TTGCCAGT 426295 >seq519 Length=112231 Score = 127 bits (140), Expect = 5e-24 Identities = 143/190 (75%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||||| | ||||||| | |||||||||| ||| || | |||||| |||||||||||||| Sbjct 63188 AGTCG-CACCTTTTGAATGTTGTAGTCACTCAAGGTACGTCCATCCTCCAGCTGCTTTCC 63246 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||||||| || ||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 63247 GGCGAAGATCAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTT 63306 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || |||| ||||| | | ||| || || | ||||| ||||| || ||||| || Sbjct 63307 GACATTGTCGATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGT 63366 Query 199612 TTTCACAAAA 199621 ||| || ||| Sbjct 63367 TTTGACGAAA 63376 >seq430 Length=527729 Score = 104 bits (114), Expect = 6e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| ||||| ||||| || |||||||||||||||| ||||||||| | | || Sbjct 369487 CGGAGTCGGAGGACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGGATAGGGTT 369428 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || || |||||||| || |||||||| | ||||||||||| || ||||||| Sbjct 369427 CGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATTCCT 369368 Query 199529 TC 199530 || Sbjct 369367 TC 369366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178911676059019