Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq52 118 1e-21 seq430 107 2e-18 >seq52 Length=836814 Score = 118 bits (130), Expect = 1e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || ||||| |||| ||||| ||||| || ||||| Sbjct 426689 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAG 426630 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| ||||| | || | | ||| |||||| ||| || |||||| ||| Sbjct 426629 ATAAGTCGCTGTTGGTCCGGTGGAATACCCTCTTTGTCCTGGATTTTGGTCTTGA-CGTT 426571 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| ||||| || |||| |||||||| || ||||||| ||| || || Sbjct 426570 GTCGATGGTGTCTGAGGATTCAACCTCCAATGTGATGGTCTTACCCGTCAACGTCTTGAC 426511 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 426510 GAAGATCTGCAT 426499 Score = 113 bits (124), Expect = 5e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || || | |||| |||||| ||||||||||||||||| | || || | || || Sbjct 426479 ACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCCTCC 426420 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| ||||| || || ||||| ||||| ||||| | || | || ||||||||| | Sbjct 426419 AGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGG 426360 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||||| ||| | | | |||||||| || || || || | |||||||| || Sbjct 426359 ATCTTGGTCTTGA-CGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTT 426301 Query 46564 GCCCGT 46569 ||| || Sbjct 426300 GCCAGT 426295 Score = 109 bits (120), Expect = 6e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 || ||||| || | | ||| | ||||| |||||||| ||||||||| || |||||| Sbjct 426959 TAGTTGCCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAG 426900 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 ||| | || || |||| || || ||||| || ||||| || | |||||||||||| Sbjct 426899 TCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCT 426840 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539 | || | | ||||||||| ||||| |||||| ||| | | | ||| ||| || Sbjct 426839 GGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTGA-CGTTGTCGATCGTATCGGATGA 426781 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || | || ||||| ||||| || || || || || || || ||||| Sbjct 426780 TTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 >seq430 Length=527729 Score = 107 bits (118), Expect = 2e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||||||| || || |||| |||||||||||||| ||||| Sbjct 369458 CTCCTTTTGGATGTTGTAGTCGGATAGGGTTCGTCCGTCCTCGAGCTGCTTGCCTGCGAA 369399 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||||||||||| | || | | |||||||| Sbjct 369398 GATCAAGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTC 369360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565233757979640