Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq52 132 5e-26 seq482 116 4e-21 seq519 91.5 1e-13 seq430 91.5 1e-13 >seq52 Length=836814 Score = 132 bits (146), Expect = 5e-26 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | ||||| || |||||||| | || || || || | Sbjct 426499 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACCATCACATTGGAGGTTGAATCCTCA 426558 Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| ||||||| ||||||||||| ||||| | |||| Sbjct 426559 GACACCATCGACAACG--TCAAGACCAAAATCCAGGACAAAGAGGGTATTCCACCGGACC 426616 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | ||| || || || || || |||| |||||||| |||||||| Sbjct 426617 AACAGCGACTTATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCCTGTCCGACTACA 426676 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||||| |||||| | || ||||| ||||| Sbjct 426677 ACATCCAGAAGGAATCAACTCTGCACTTGGT 426707 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||| || |||| ||||| | || Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | || | | | | |||| ||| || | ||||| || ||||| || | ||||| Sbjct 426787 GATA-CGATCGACAACGTCAAGACAAAGATTCAGGACAAGGAAGGAATCCCACCAGACCA 426845 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || || ||||| |||| || || | | ||||||||| Sbjct 426846 GCAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGACGTACGTTGAGCGACTACAA 426905 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| |||||||| |||| |||| |||||||| ||| | | |||||| Sbjct 426906 CATTCAAAAGGAGTCGACATTGCACTTGGTGCTACGTCTCCGTGGCGGC 426954 Score = 102 bits (112), Expect = 8e-17 Identities = 126/169 (75%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| |||| || ||| ||| ||||| | | | |||| | |||| Sbjct 426295 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACG--TCAAGA 426352 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || || | ||||||||||| | || | ||||||| Sbjct 426353 CCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGCA 426412 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 |||||||||| || | || ||| | ||||||||| ||||| ||||| Sbjct 426413 AACAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGA 426461 >seq482 Length=325002 Score = 116 bits (128), Expect = 4e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || || ||| |||| |||||| || | ||| ||||| |||||| ||| ||||| Sbjct 233291 GCAGGCGAAATCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAA 233350 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 |||||||||||| ||||| || |||||||| || |||| |||||| || ||||| Sbjct 233351 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAA 233410 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGC 133047 || |||||||||||| || || || || || ||| Sbjct 233411 GATGCCCTCGACGGCGGCAAAGGCGACGAGACGC 233444 >seq519 Length=112231 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| ||||| ||||| || || |||||||| | || ||||| | | |||| | Sbjct 63375 TTCGTCAAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATC 63316 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| || ||||| ||||| || | ||||||||||||| Sbjct 63315 GACAATG--TCAAGACTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGC 63258 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || |||||||| || | || ||| | | ||||||||||| |||| Sbjct 63257 TGATCTTCGCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAA 63198 Query 38431 AGG 38433 ||| Sbjct 63197 AGG 63195 >seq430 Length=527729 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || ||||||||| | ||||| ||||| | || | ||| ||||| ||||| || Sbjct 369360 GACAAGGAAGGAATTCCCCCAGACCAGCAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAG 369419 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||| || ||||| ||||||||||||||||||||| |||| || || Sbjct 369420 GACGGACGAACCCTATCCGACTACAACATCCAAAAGGAGTCGACACTTCA 369469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168692330880