Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq52 125 5e-23 seq525 102 6e-16 >seq52 Length=836814 Score = 125 bits (138), Expect = 5e-23 Identities = 419/642 (65%), Gaps = 14/642 (2%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || || ||||||||||||||||| | ||| | || | || | | ||| Sbjct 455591 ACGAGACGGTTGTCGAAATCTTCACCTCCCAAGTGAGTGTCACCAGCAGTGGACTTGACT 455532 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | || ||||||| | ||| |||| ||||| |||||| ||||| | ||| Sbjct 455531 TCAAAGATACCCTCTTCAATGGTCAACAGAGACACATCGAAGGTTCCTCCACCAAGATCG 455472 Query 518135 AAAATAAGTACATTCATTTCTTTGTC-TTGG--TTTTTATCAAGACCATACGCAAAAGCA 518191 || || || ||||| ||| | | ||| || || || ||||| || |||| ||| Sbjct 455471 AAGATTAGAACATTGCGTTC---GCCAGTGGCCTTCTTGTCGAGACCGTAGGCAATTGCA 455415 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 || || || || || || || || | || ||||| || || |||||| || || ||| Sbjct 455414 GCGGCTGTGGGCTCGTTGATGATACGCAGGACATTGAGGCCTGCAATTAGACCGGCGTCT 455355 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 || || ||||||| || || ||||| || ||||| || || || | ||||||| | Sbjct 455354 TTGGTAGCTTGTCGCTGAGAGTCGTTGAAGTATGCTGGGACTGTGACGACGGCATTGTTG 455295 Query 518312 AC--TTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATG 518369 || | | | |||| ||| | || || | | ||| || | |||||||| || | Sbjct 455294 ACGGTACCT--CCAAGATATGACTCGGCTGTCTCTCGCATCTTGGTCAAAATCATGGAGG 455237 Query 518370 AAATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGT 518428 | |||| ||||| | | ||||| || |||| | | || | || | || Sbjct 455236 AGATTTCCTCTGGTGTGAAAGTCTTGGTCTCGCCCTTGAATTCAATCTGGACAACA-GGC 455178 Query 518429 TTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG 518488 || ||| | || || || || || ||| |||||||| | |||||| || || Sbjct 455177 TTGCCACCCTTGTCGATGACCTTGAAAGGGAAGTGCTTCATATCAGCTTGAAC-CTCAGG 455119 Query 518489 -TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAT 518547 || ||| | | || || | || || ||||| || | || ||| || || || Sbjct 455118 ATCCGCAAACTTGCGGCCGATGAGGCGCTTGGCATCGAAGACTGTGTTGACGGGGTTCAT 455059 Query 518548 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 518607 || |||| | || || | || ||||| ||| | || || || || || | |||| | Sbjct 455058 GGCGACTTGGTTCTTCGCCGAGTCACCAATGAGACGCTCCGTGTCGGTGAAGGCAACAAA 454999 Query 518608 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 || || ||||| || ||||| || ||||| || || ||||| Sbjct 454998 CGACGGTGTTGTTCGGTTACCCTGGTCATTGGCGATGATTTC 454957 >seq525 Length=1454817 Score = 102 bits (112), Expect = 6e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| ||||| ||||||||| | ||||| ||||||||||||||||||||||| | || Sbjct 688232 TTAAAGGGTAAGGAAGGTCGTCTCAGAGGCAATTTGATGGGAAAACGTGTCGACTTCTCC 688291 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 || || || || |||||| |||||| || | ||||| ||||||| ||||| || Sbjct 688292 GCCCGAACCGTCATTACTGGTGATCCGAACTTGTCTCTCGATGAAGTCGGTGTGCC 688347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780789797495842