Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq52 293 3e-74 seq1 129 7e-25 seq338 104 3e-17 >seq52 Length=836814 Score = 293 bits (324), Expect = 3e-74 Identities = 492/704 (70%), Gaps = 22/704 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||||||||| |||||||| || || || || || | ||||||||||||||||| Sbjct 455579 TCGAAATCTTCACCTCCCAAGTGAGTGTCACCAGCAGTGGACTTGACTTCAAAGATACCC 455520 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| | |||| || ||||| || || || ||||| || || || || || || Sbjct 455519 TCTTCAATGGTCAACAGAGACACATCGAAGGTTCCTCCACCAAGATCGAAGATTAGAACA 455460 Query 7577 TT-CGTATCGTCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || ||| ||| | || ||||| ||||||||||| || || || || || || || Sbjct 455459 TTGCGT----TCGCCAGTGGCCTTCTTGTCGAGACCGTAGGCAATTGCAGCGGCTGTGGG 455404 Query 7633 TTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || || ||||| | |||| || ||||| ||||| | || ||||| || |||| Sbjct 455403 CTCGTTGATGATACGCAGGACA-TTGAGGCCTGCAATTAGACCGGCGTCTTTGGTAGCTT 455345 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| || || ||||| ||||| || ||||| || ||||| || | |||| | | Sbjct 455344 GTCGCTGAGAGTCGTTGAAGTATGCTGGGACTGTGACGACGGCATTGTTGACGGTACCTC 455285 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | ||||| || || || | ||| ||| ||||| | || ||| || || || || || | Sbjct 455284 CAAGATATGACTCGGCTGTCTCTCGCATCTTGGTCAAAATCATGGAGGAGATTTCCTCTG 455225 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC 7871 | || || || || || || || |||| | | | || || || ||| Sbjct 455224 GTGTGAAAGTCTTGGTCTCGCCCTTGAATTCAATCTGGACAACAGGCTT----GC--CAC 455171 Query 7872 C---GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAA 7928 | | ||| ||||| | | | | |||||||| |||| |||| | |||| || Sbjct 455170 CCTTGTCGATGACCTTGAAAGGGAAGTGCTTCATATCAGCTTGAACCTCAGGATCCGCAA 455111 Query 7929 ACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988 |||| | ||||| || ||||| ||||| || |||||||| |||||||||||| || Sbjct 455110 ACTTGCGGCCGATGAGGCGCTTGGCATCGAAGACTGTGTTGACGGGGTTCATGGCGACTT 455051 Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048 |||||||||||| ||| || || ||||| || | || || || || || |||| | Sbjct 455050 GGTTCTTCGCCGAGTCACCAATGAGACGCTC---CGTGTCGGTGAAGGCAACAAACGACG 454994 Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108 | || ||||| || || ||||| || || || ||||| | |||||||| | | ||| | Sbjct 454993 GTGTTGTTCGGTTACCCTGGTCATTGGCGATGATTTCGATGCGGTCGTCTCGGAAGATAC 454934 Query 8109 CGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | ||||| || ||||| || || ||||| |||||||| ||| || Sbjct 454933 CCACGCATGAGTACGTGGTACCCAAATCGATACCGATAGCTGGA 454890 >seq1 Length=836259 Score = 129 bits (142), Expect = 7e-25 Identities = 231/329 (70%), Gaps = 10/329 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || ||||| || ||| | ||||| ||||| | || Sbjct 402163 ATCGAAATCTTCACCACCGAGATGGGTATCACCGTTGGTAGACTTGACCTCAAAAACGCC 402104 Query 7516 TCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 || || | || ||| || ||||| || || ||||| |||| || ||| | | Sbjct 402103 CTTTTGGATCTC-AAGAACTGAGACATCGAAAGTTCCACCGCCCAAATCGTAAACGGCGA 402045 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | | |||| |||| ||| || |||||||| || | || || || ||||| | Sbjct 402044 CAAC---ACGGTCG-CTTTC--CTTGTCTAGACCGTAAGCAAGGGCGGCAGCAGTTGGCT 401991 Query 7635 CATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || |||| ||| || ||| ||||| |||| ||| | | ||||| || || ||||| Sbjct 401990 CGTTGATAACACGGAGGACA-TTCAGTCCAGAAATGGCACCAGCATCCTTAGTGGCTTGA 401932 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || |||||||| |||||||| ||||| || ||||| |||| | |||| | ||| ||| Sbjct 401931 CGCTGGGAATCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTTCTTGACATCCTTTCCG 401872 Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782 || || | | || | ||||||||||| Sbjct 401871 AGGTAGGCCTGGGCAGTCTCTTTCATTTT 401843 >seq338 Length=597207 Score = 104 bits (114), Expect = 3e-17 Identities = 221/329 (67%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || || || | ||| Sbjct 405135 TCGAAATCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGAGAGAACCTCGAAAACACCA 405194 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA---AATGAGT 7573 || | | | |||||||| || || |||||||||| ||| | ||||| Sbjct 405195 GAGTCGACAGTCAGAGCGGAAACATCGAAGGTTCCACCACCCAAGTCGTAGACAATGATC 405254 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | || || || | | ||||||||||||||| || | ||| || || ||||| Sbjct 405255 TGGCGC---TCCTCCTCACTCTGCTTATCGAGACCGTAAGCCAGAGCGGCTGCGGTTGGC 405311 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | || ||||||| ||| || ||||| |||||| | || || || || || Sbjct 405312 TCGTTGACAACACGAAGAACGTTAAGACCAGCGATAGTTCCAGCGTCCTTTGTGGCGGCA 405371 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || ||||| ||||| || ||||| || || || |||| ||| || | || Sbjct 405372 CGCTGGTTGTCGTTGAAGTATGCAGGGACAGTCACAACGGCGTTGACGACCTTTTGTCCC 405431 Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782 | || ||||| |||| || ||||| || Sbjct 405432 AAGTAGGATTCGGCGACTTCCTTCATCTT 405460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127583971880