Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq115 138 1e-27 seq482 105 8e-18 seq52 98.7 1e-15 >seq115 Length=330173 Score = 138 bits (152), Expect = 1e-27 Identities = 697/1085 (64%), Gaps = 42/1085 (4%) Strand=Plus/Plus Query 112278 TGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGA 112336 ||| | || ||||| |||| | || |||||||| || | || | ||||||||| ||||| Sbjct 101963 TGGTACGCCATTCTACAAGCC-CAGACCGAGACCGGCAACCCTTTTATGCTTTATAAAGA 102021 Query 112337 CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTG 112396 || || || | |||||||| || ||||| ||||| ||| || |||||| | || Sbjct 102022 TGCTTGCAATCGCAAGAGTAACCAGAAGAACTTGGGAACCATCCGCAGCTCCAACTTGTG 102081 Query 112397 TACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 112456 || || ||| | |||| | | ||||||| |||||||| ||| | ||||| || Sbjct 102082 CACTGAGATCATCGAATACTCTGCGCCAGATGAGGTCGCTGTGTGCAACTTGGCATCCAT 102141 Query 112457 CGCTCTCCCCAAGTATGTGGA--TCCAGAGACAAAGACATTTGATTATGAAAAACTCCAC 112514 || | || | | || || | || | | | | | ||||| | || | ||| Sbjct 102142 GGCGTTGCCGACCTTCGTTGACGTGCAACG-CGGCGTC-TATGATTTCAACAAGTTGCAC 102199 Query 112515 GAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCC 112574 ||||| | || ||| ||| | |||| | |||||| || |||||| Sbjct 102200 GAAGTCGTTCAGACGGTCGTCCGAAATTTGAACAAGATCATTGATGTCAACCACTACCCC 102259 Query 112575 GTTGAGACTGCTCGTAA-ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGG 112633 ||| || || | | | | | | || |||||| | ||| ||||||| || || Sbjct 102260 GTTCCTGAAGCATACAACAGCAACTCTC-GTCATCGTCCAGTCGGTGTCGGTGTGCAGGG 102318 Query 112634 TCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGA 112690 ||| || |||| ||| || || ||| | | || || || ||||| || | Sbjct 102319 TCTTGCTGATGCTTTCCTTGCGCTCCGTCTACCC---TTCGAGTCTCCTGAAGCAAAAAA 102375 Query 112691 AATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG--AG 112748 |||| | || || |||||||| |||||||||||||| || | || | | || Sbjct 102376 GCTCAACATTCAAATCTTCGAGACAATCTATCACGCCGCTCT-GAC-CTCGTCCTGCAAG 102433 Query 112749 TTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTG 112808 | || | | || ||| |||| | ||| || || || || | ||| ||||| | Sbjct 102434 CTCGCGCAAGAGGAGGGTACATACAAGTCCTACGAAGGCTCACCCGTTTCCCAAGGCATT 102493 Query 112809 CTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTCA 112866 || || | || |||||| || || | ||| | || || || ||||||||| | |||| Sbjct 102494 CTCCAGTACGACATGTGG-AACGTCACACCCA-CTGATCTCTGGGACTGGGACTCGCTCA 102551 Query 112867 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 112926 ||| |||||| | | ||| | || || ||| | | || || ||||| || | Sbjct 102552 AGGCTGATATCAAGAGGCACGGTGTCCGCAATTCGCTTCTTGTTGCTCCTATGCCGACTG 102611 Query 112927 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCT 112986 | ||||| | || || | ||| ||||| ||||| || || |||||| ||||||||| Sbjct 102612 CTTCCACATCTCAGATTCTCGGTTTCAATGAGTGCTTCGAGCCATACACGTCGAACATCT 102671 Query 112987 A-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCGTGGATG 113043 | ||| | || || || |||||||| | | || ||| ||| || | | | Sbjct 102672 ACTCTC-GTCGAGTGCTTGCTGGAGAGTTCCAGGTCGTTAACC--CATGGCTACTCAAGG 102728 Query 113044 ACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA----TGGTGAAAGCG 113099 | ||| ||||| ||||||||||| | | |||||| ||| || || |||| Sbjct 102729 ATCTCGTCGAGATGGGTCTCTGGTCTGACAACATGAAGAATCGCATCATTGCTGAA---- 102784 Query 113100 GGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACA 113159 ||||| ||||| |||||||| | || || ||||| || || ||||| || Sbjct 102785 GGTGGCTCCATCCAAAATATACCCAACATCCCTGATGACATCAAAGCCCTGTACAAGACC 102844 Query 113160 GTTTGGGAAATCA---AGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 113216 || ||||| |||| || | | | |||| ||||||||| || || ||| || Sbjct 102845 GTCTGGGAGATCAGTCAG-CGTACCA--TCATAACCATGGCCGCCGACCGCGGTGCGTTT 102901 Query 113217 ATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCT 113276 ||||||||| ||| || |||| | |||| || || || ||| |||| || | Sbjct 102902 ATTGATCAATCTCAGAGCTTGAACATCCACATGAAAGAGCCCACCATGGGCAAGATCACG 102961 Query 113277 TCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCT 113336 || |||||| | ||||||||| |||| | || || || ||||| || |||||| | Sbjct 102962 TCCATGCACTTCGCTGGTTGGAAGATGGGTTTGAAGACCGGCATGTACTATCTCCGAACA 103021 Query 113337 AAGGC 113341 | ||| Sbjct 103022 ATGGC 103026 >seq482 Length=325002 Score = 105 bits (116), Expect = 8e-18 Identities = 336/516 (65%), Gaps = 10/516 (2%) Strand=Plus/Minus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 102165 |||| || || || | ||||| || || ||||| |||||||| || ||| || | Sbjct 233517 CAGTCCCTTGCATCCGGAAGAAGGCCGACTGGGCATTGAAGTGGATTTGCGATGACAACT 233458 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | | |||| || ||| ||| |||| ||||| || ||||| ||||||||| | Sbjct 233457 C---TACCTTCGCGTCGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCG 233401 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || | ||| | || | |||||||||||||| ||||||||||| || | ||||| Sbjct 233400 GTGCTTTCGCATCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCT 233341 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCA 102345 |||||||||| ||||| || || ||||| | ||| || || || |||||| Sbjct 233340 CCAACGAGCTCATCTCCCGCGATGAGGGCATGCACACCGATTTCGCCTGCCTCCTTTTCT 233281 Query 102346 AATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTG 102405 | | | || || || |||| | | | |||| ||| || || || Sbjct 233280 CACAGCTCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCTATCATTACTGAGGCAGTAC 233221 Query 102406 AGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTG 102465 | || ||| ||| ||| | || || || |||||| || |||| ||||| || | Sbjct 233220 AAATCGAGCAGGAGTTCTTGAGCGAGGCTCTACCATGCAGACTGCTCGGCATGAACTCGG 233161 Query 102466 AAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG-AAGCAGATCGGGGTG 102524 | |||| | |||| ||||||| ||| ||||| | | || || | | || Sbjct 233160 GACTTATGTGCCAATACATTGAGTTTGTTGCTGATCGTCTACTGCTCGCGCTTGGCAATG 233101 Query 102525 CCTCCA-ATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGG 102583 || | ||| || | || || ||||||||||||||||| ||| ||||| ||| Sbjct 233100 --TCAAGGTTTACAATGCTGTCAACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGG 233043 Query 102584 GAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619 ||||| || |||||||| ||| | || || ||||| Sbjct 233042 AAAGACGAATTTCTTCGAGAAGCGTGTGGGTGACTA 233007 >seq52 Length=836814 Score = 98.7 bits (108), Expect = 1e-15 Identities = 350/537 (65%), Gaps = 35/537 (7%) Strand=Plus/Plus Query 15849 CGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGGCGAAGG 15908 ||||| || ||| ||| | || || | || || || ||||| || || || ||| Sbjct 698777 CGTCCACGGACATCTGGCAAAGGAACATTGACGTTGCGGTCAAAACGGCCGGGTCGAGTA 698836 Query 15909 AGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCG 15968 ||||||| ||| || || ||| || || || |||| || || || || | Sbjct 698837 AGCGCGTGATCGAGCGACTCGGGAAAATTGGTGGCTGCAATGATAATGATGCCACTTCCT 698896 Query 15969 TTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTC 16028 | |||||| ||||| | || |||||||| ||||| | |||||||| Sbjct 698897 TGATCAAATCCATCGAGTTCGGTCAAAAGTTGGTTCAGAGTTTGTT-------------- 698942 Query 16029 GCTGGCATAC-CACCAGCACT---GCGTTGCTTTCCCACG---GCATCAATCTCATCAAT 16081 ||||||| ||||| | | | || | ||||| | ||||| | ||| || || Sbjct 698943 --TGGCATAAGCACCATCGCGTGGGTGTCGTTTTCCTCCAATCGCATCCAACTCGTCGAT 699000 Query 16082 GAAGACGAT-GCATGGTTGATTTT-CGCGAGCGACTT-CAAAGAGATCCCGTACACGCTT 16138 ||||| ||| ||| || || || ||||||| |||| | ||||| || || |||||||| Sbjct 699001 GAAGATGATAGCAGGG--GACTTAGCGCGAGC-ACTTGCGAAGAGCTCTCGCACACGCTT 699057 Query 16139 GGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGAC 16198 ||||| ||||| ||| ||||||| |||| | | | || | || ||| || || Sbjct 699058 CGCGCCGACACCGACATACATCTCATCAAATTCGGATCCAGAGGCATAGAAGAACGGAAC 699117 Query 16199 ATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGC 16258 | ||| || || | || | ||||| ||||||||||| |||||||| ||| | Sbjct 699118 GCCGGCTTCGCCAGCGACTGCCCTAGCGAGTAGAGTCTTACCGGTACCTGGTGGACCAAC 699177 Query 16259 GAGGAGGGCACCTCGTGGAATCTTGGCG-CCACT-TCCA-AAGTATCTCTCAGGTTGCTT 16315 || || | ||| ||||| ||| || ||| | || | || | | | || | ||| Sbjct 699178 AAGCAGAACCCCTTTTGGAAGCTTACCGCCCAGTGTCGAGAACTGT---TTGGGGTCCTT 699234 Query 16316 AAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || |||| | ||||| ||| || |||||||| | || || |||||||| Sbjct 699235 CAGGAATGCCACCAGCTCTTGCAACTCTTCTTTGGCTTCATCGCAACCTTCAACATC 699291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737302153040