Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq314 125 8e-24 >seq314 Length=245078 Score = 125 bits (138), Expect = 8e-24 Identities = 174/244 (71%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 158456 TTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGA 158515 |||| | |||| ||| || |||||||| ||||| |||||||||| |||||| ||||| Sbjct 228258 TTCCCTTCGGATTCGGTGGCCCTCATGCAGCATTTTTTGCAACAAGTGACAAGCATAAGC 228317 Query 158516 GAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACA 158575 ||||||| ||||| | | | ||| ||| ||||| || ||| || | Sbjct 228318 GAAAGATCCCTGGTCGTTTGATCGGTTTATCAAAGGATAGGCTTGGAAATCCCGCGGCAA 228377 Query 158576 GATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCT 158635 | | || || ||||| ||||||| || || || | || || || ||||||||||||| Sbjct 228378 GGCTGGCTCTCCAGACGCGAGAGCAACACATTCGACGTGAGAAGGCGACCAGTAACATCT 228437 Query 158636 GCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAG 158695 |||| |||||||| || |||| |||||| | |||||| |||| || ||||| ||| Sbjct 228438 GCACTGCACAAGCGCTTTTGGCCAATATGAGCGCGTTCTACGCAGTCTACCATGGACCAG 228497 Query 158696 ATGG 158699 | || Sbjct 228498 AGGG 228501 Score = 104 bits (114), Expect = 3e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 159611 TTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAG 159670 ||||||| | | || ||||| || || | || ||||| || | ||||| || | | Sbjct 229467 TTGTTCACCAATACGGCGGTCAAGTTTACATGGACGGTGCGAACATGAATGCTCAAATCG 229526 Query 159671 GTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACAT 159730 |||| || |||| |||||| ||||| || ||||| ||||| || ||||| | Sbjct 229527 GTCTTTGCTCCCCTGGTGAGATTGGTGCTGATGTTTGCCATCTCAACTTGCACAAGACGT 229586 Query 159731 TCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATC 159790 |||||||||| || ||||||||||| || || || ||||| |||||||| || |||| Sbjct 229587 TCTGTATTCCTCACGGAGGTGGAGGGCCAGGTGTTGGTCCGATTGGTGTCAAGAAGCATC 229646 Query 159791 TCACACCATT 159800 | ||||| || Sbjct 229647 TTACACCCTT 229656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588046370629520