Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq52 140 7e-28 seq519 114 3e-20 seq430 107 4e-18 >seq52 Length=836814 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||| ||||| || || || || || ||||| |||| || || | || || Sbjct 426710 AAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 426651 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| ||||| || |||||||||||||| |||||||| || ||||| || |||||||| Sbjct 426650 TCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGAATACCCTCTTTGTCC 426591 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || ||||| ||||||||| || |||||||| || ||| || || | || | ||| Sbjct 426590 TGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAACCTCCAATGTGATGGTC 426531 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| || || ||||| | ||||| Sbjct 426530 TTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| |||||||| ||||| ||| | || | || ||||| || ||||| ||| Sbjct 426923 GTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCT 426864 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || |||||||| || || ||||| ||||| ||||| ||| |||| Sbjct 426863 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTG 426804 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||| || || || || || ||| ||||| || |||| ||||| || || | ||| Sbjct 426803 ACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTC 426744 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 426743 TTCACGAAAATCTGCAT 426727 Score = 114 bits (126), Expect = 3e-20 Identities = 117/150 (78%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 |||||||| || || ||||| || || |||||||| |||| |||| || | ||||| || Sbjct 426479 ACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAG-GTACGGCCATCCTC 426421 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || || || ||||| | || ||||||||||| || ||||| || |||||||| Sbjct 426420 CAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTG 426361 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || |||||||| Sbjct 426360 GATCTTGGTCTTGACGTTGTCGATGGTGTC 426331 >seq519 Length=112231 Score = 114 bits (126), Expect = 3e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGAT 195011 |||||||| ||||| || |||| || | ||||| || |||||||| || |||||||| Sbjct 63197 TTTTGAATGTTGTAGTCACTCAAG-GTACGTCCATCCTCCAGCTGCTTTCCGGCGAAGAT 63255 Query 195012 AAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTC 195071 || || ||||||||||| || || |||||||| || || || || |||||| || || Sbjct 63256 CAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTGTC 63315 Query 195072 AATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || ||||| || ||| || ||||| || | |||||||| || | ||||| ||||| Sbjct 63316 GATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGACGAA 63375 >seq430 Length=527729 Score = 107 bits (118), Expect = 4e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| ||||| || ||||| |||| || |||| || || ||| Sbjct 369475 ACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGGATAGGGTTCGTCCGTCCTCG 369416 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| ||||||||||| | || || |||||||| ||||| ||||| |||||| Sbjct 369415 AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 369359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109472260591919