Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq52 98.7 6e-16 >seq52 Length=836814 Score = 98.7 bits (108), Expect = 6e-16 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATC 34831 |||||||| | ||| || || |||||||| ||||| | || | | ||| | || || Sbjct 426935 ACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACG-TACGTCCGTCTTC 426877 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| || ||||| || || || || || ||||||||| | || | || |||||||| Sbjct 426876 CAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTG 426817 Query 34892 AATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 |||||| ||| |||||| | |||| || | || || |||| || ||||| | Sbjct 426816 AATCTT-TGTCTTGACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCT 426758 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || |||||||||||||| || ||||||||| Sbjct 426757 TGCCGGTGAGAGTCTTCACGAAAATCTGCATA 426726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631000597896