Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq482 113 8e-20 >seq482 Length=325002 Score = 113 bits (124), Expect = 8e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||| || || |||||| ||| || || ||| ||||||| ||||||||||| | Sbjct 233291 GCAGGCGAAATCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAA 233350 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||||| || | || ||||||||||| || | ||||||| || |||||| Sbjct 233351 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAA 233410 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||||||||| || || || || ||| ||| | | |||| | || ||| | || | Sbjct 233411 GATGCCCTCGACGGCGGCAAAGGCGACGAGACGCGACGCGAAGGTAGAGTTGTCATCGCA 233470 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | |||||||| ||||||||| |||||| || Sbjct 233471 AATCCACTTCAATGCCCAGTCGGCCTTCTTCCGGATGCAAGG 233512 Score = 104 bits (114), Expect = 4e-17 Identities = 180/260 (69%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| |||||||||||||| ||||||||| | || || | Sbjct 233642 TCTCGGAGTGAATGTTCTCCATAGCGATCTGGAAACCGTAGAAGCATCGAGCTTCTGGAA 233701 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| || || || ||||| ||| || |||||||| ||||| || ||||| || || | Sbjct 233702 CCTGGACCTCATTGCTGAATCGCTCAAGGAGATTCTCGTTGACAATGCCATCCGATGCTG 233761 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604 | ||||| || || | || | ||| ||| |||| | | |||| || ||| Sbjct 233762 CGAAGAATGCGAGAATGTGGGAGATGAAGAAGCGTTCGTCATCGTTGAG-GCGGTTGTTC 233820 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | | || |||||| || || | ||||| |||||||||| || || | || Sbjct 233821 CAGTCTGGCACATCTTTGGAGAGATCGATCTCTTCGGCAGTCCAGAACGAGGCCATGGCC 233880 Query 48665 TTTTTGTACATGCCCCATAT 48684 || |||||||| | ||| || Sbjct 233881 TTCTTGTACATACGCCAGAT 233900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525149786880