Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq482 147 4e-30 seq115 131 3e-25 >seq482 Length=325002 Score = 147 bits (162), Expect = 4e-30 Identities = 335/511 (66%), Gaps = 9/511 (2%) Strand=Plus/Minus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873 ||||| || |||||| ||||| |||||||||| | | | | |||| || | Sbjct 233508 GCATCCGGAAGAAGGCCGACTGGGCATTGAAGTGGATTTGCGATGACAACTCTACCTTCG 233449 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933 ||| || || |||||||| || || ||||||||||| ||||||||| | || || Sbjct 233448 CGTCGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCAT 233389 Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 ||||||||||||||||| || || ||||||||| || ||| ||||||||||||| Sbjct 233388 CCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCA 233329 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGC 26053 || | | || ||||| | |||| ||||| |||||||| || | | ||| || Sbjct 233328 TCTCCCGCGATGAGGGCATGCACACCGATTTCGCCTGCCTCCTTTTC-----TCAC-AGC 233275 Query 26054 TCCAC---AAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCG 26110 || || || ||||| | || ||||| | |||||| | ||||| || | |||| Sbjct 233274 TCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCTATCATTACTGAGGCAGTACAAATCG 233215 Query 26111 AGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCA 26170 || ||||||| | ||||||||| |||| | Sbjct 233214 AGCAGGAGTTCTTGAGCGAGGCTCTACCATGCAGACTGCTCGGCATGAACTCGGGACTTA 233155 Query 26171 TGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGAC 26230 || ||||||||||||||| ||| || || | ||| ||| | ||| || | || Sbjct 233154 TGTGCCAATACATTGAGTTTGTTGCTGATCGTCTACTGCTCGCGCTTGGCAATGTCAAGG 233095 Query 26231 TCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCA 26290 | |||| | | ||||| || ||||| ||||| || || || | | || ||||| | Sbjct 233094 TTTACAATGCTGTCAACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGGAAAGACGA 233035 Query 26291 ACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 | ||||| || ||| | || || ||||| || Sbjct 233034 ATTTCTTCGAGAAGCGTGTGGGTGACTACCA 233004 >seq115 Length=330173 Score = 131 bits (144), Expect = 3e-25 Identities = 440/679 (65%), Gaps = 16/679 (2%) Strand=Plus/Minus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 || |||||||| |||| | ||| | || ||| | || |||||| ||||| || ||| Sbjct 101800 GGGCACATCAGCGTCCACTCGCCGTTCTGTTCGACTCGCTTCATGAATAGGTCGGGAATC 101741 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || | || ||||| | | || ||| || ||||| ||| || |||||| Sbjct 101740 CACAAGGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGCCGTGGTTCTTTCTCAGA 101681 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 ||||| | | | | || |||||||| ||||| || || | ||| | || || || Sbjct 101680 TCCAACCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAATGGCAAATGCACCAGGA 101621 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238 |||||||| ||||| ||||| || | | |||| ||||| || || | || Sbjct 101620 CGCTTGTTTCCACCTTGATCGACGTAGCGAGCAGTCGCGTCGAAGACACGGAGCATGGGA 101561 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 || || ||||| ||| ||||| || || |||||| | ||| ||| || | || Sbjct 101560 ACAAGCCCGTTTGATGTGCCGTTTGTTCCTCCAATGTATGATCCGGTGGCTCT---GATA 101504 Query 222299 CTG-GCAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | | ||| | | || ||||| || ||| ||||| ||||| || || |||| || Sbjct 101503 CGGTGCACATTGAGACCAATACCGCCAGCGGTCTTCGAAATCATCGCACAAGTCTTAAGG 101444 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| || ||||| || |||||| || | | || || |||||||| | | Sbjct 101443 GTGTCGTAAATACCCTCAATGCTGTCCTCTTTTGTATCGATGAGGAAGCAAGACGAGAGC 101384 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 || | || | | | || ||||| |||||||| ||||||||||||||| | Sbjct 101383 TGTGGTTGAGGTGTGCCTGCATTAAAAAGCGTGGGCGAGGCGTGTGTAAAGTATTTGTTC 101324 Query 222476 GACATCAGATCGTACGTCT--CTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGG 222533 ||||| | ||| |||| || | || | || | |||||||||||| | | Sbjct 101323 GACATGTAGTTGTATGTCTGGATAGCAGCCT--CAATATCCTCCCCGTGAATCCCAACAG 101266 Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC---TGGAGAGCA 222590 | | |||| ||| | || || | || ||| ||||| || | ||||| Sbjct 101265 CTACGCGCATGATCATATGTTGTGGACGCT---CAGCGACCTTGCCGCTTATCCGGAGCA 101209 Query 222591 GGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAA 222650 |||||||| || || || ||||| |||||||| | | | ||||||||| ||| | Sbjct 101208 GGTACGATCGCTCGAGCGTTTTGAAACCAAAGTATTGGTAATTGAAGTCTCTGTCGTAGA 101149 Query 222651 CCACGGCGGCGTCCAGCTC 222669 | | |||| || |||||| Sbjct 101148 CAATAGCGGAGTTCAGCTC 101130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837171862080