Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq52 152 3e-31 >seq52 Length=836814 Score = 152 bits (168), Expect = 3e-31 Identities = 357/533 (67%), Gaps = 12/533 (2%) Strand=Plus/Plus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || ||||||||||| ||||| |||||||||| || | |||| | || || || Sbjct 454957 GAAATCATCGCCAATGACCAGGGTAACCGAACAACACCGTCGTTTGTTGCCTTCACCGAC 455016 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| ||||| || | || || | |||| || || || || || || Sbjct 455017 ACGGAGCGTCTCATTGGTGACTCGGCGAAGAACCAAGTCGCCATGAACCCCGTCAACACA 455076 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || ||||| || | | || || || || |||| ||| | || ||| ||||| Sbjct 455077 GTCTTCGATGCCAAGCGCCTCATCGGCCGCAAGTTTGCGGATCCTGAGGTTCAAGCTGAT 455136 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAAGCAA 474629 ||| || | ||||| ||||| || | ||||| || || | | ||| || Sbjct 455137 ATGAAGCACTTCCCTTTCAAGGTCATCGACAAGGGTGGCAAGCCTGTTGTCCAGATTGAA 455196 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || || || || |||| || |||| || || ||| |||| ||| Sbjct 455197 TTCAAG--GGCGAGACCAAGACTTTCACACCAGAGGAAATCTCCTCCATGATTTTGACCA 455254 Query 474690 AAATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | ||| | | || | |||| |||||||||||| || | |||| || | || Sbjct 455255 AGATGCGAGAGACAGCCGAG-TCATATCTTGGAGGTACCGTCAACAATGCCGTCGTCACA 455313 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || |||||||| || || || ||||| || ||||| || ||||| || || ||||||| Sbjct 455314 GTCCCAGCATACTTCAACGACTCTCAGCGACAAGCTACCAAAGACGCCGGTCTAATTGCA 455373 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 || || ||||| | ||||| || || || || ||||| || ||| |||| || ||||| Sbjct 455374 GGCCTCAATGTCCTGCGTATCATCAACGAGCCCACAGCCGCTGCAATTGCCTACGGTCTC 455433 Query 474869 GATAAGAA---TTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 || ||||| ||| | ||| |||||| ||||||| ||| ||| || Sbjct 455434 GACAAGAAGGCCACTGGC---GAACGCAATGTTCTAATCTTCGATCTTGGTGG 455483 Score = 102 bits (112), Expect = 5e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| ||||||||||| || || || || || || || || || || |||||||||||| Sbjct 426881 TCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTG 426822 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || ||||||||| ||||| || || ||||| | || | | ||| || ||||| Sbjct 426821 TCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGA-CTTCGAGTGTAAT 426763 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||||||||| |||||||| || Sbjct 426762 GGTCTTGCCGGTGAGAGTCTTCACGAAAATCTG 426730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268151018082236