Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq115 98.7 5e-16 >seq115 Length=330173 Score = 98.7 bits (108), Expect = 5e-16 Identities = 292/448 (65%), Gaps = 2/448 (0%) Strand=Plus/Minus Query 25916 TTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTC 25975 || || || ||| || ||| |||| || |||||||||| ||||| || | ||| | Sbjct 101776 TTCTGTTCGACTCGCTTCATGAATAGGTCGGGAATCCACAAGGCATAGAAAAGATCGCGA 101717 Query 25976 GCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAG 26035 || | |||||||| ||||| |||||| | ||||| || | | | | ||||| | Sbjct 101716 GCACGTGCCTCTTCTTTGCCGTGGTTCTTTCTCAGATCCAACCAGTTGATGACATCTGCG 101657 Query 26036 TGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACG 26095 |||||||| || | || || ||||| ||| | || |||||||||||| ||| Sbjct 101656 TGCCATGGCTCGAGGTAAATGGCAAATGCACCAGGACGCTTGTTTCCACCTTGATCGACG 101597 Query 26096 TATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTT 26155 || | ||||| | | ||| || | ||| ||||| | || |||| |||||| Sbjct 101596 TAGCGAGCAGTCGCGTCGAAGACACGGAGCATGGGAACAAGCCCGTTTGATGTGCCGTTT 101537 Query 26156 GTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCA 26215 || | ||| | ||||| || | ||| ||| ||| ||| | ||| || || ||| Sbjct 101536 GTTCCTCCAATGTATGATCCGGTGGCTCTGATACGGTGCACATTGAGACCAATACCGCCA 101477 Query 26216 GCCCATTTTGAAATAGCTGCACAA-TCTGAAACTGTATCGAAAATTCCTTTTATGCTATC 26274 || || ||||| |||||| ||| || || ||| |||| || | ||||| || Sbjct 101476 GCGGTCTTCGAAATCATCGCACAAGTCT-TAAGGGTGTCGTAAATACCCTCAATGCTGTC 101418 Query 26275 ACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAA 26334 |||| | | | | || ||||| || | || | |||| ||| |||| |||||| Sbjct 101417 CTCTTTTGTATCGATGAGGAAGCAAGACGAGAGCTGTGGTTGAGGTGTGCCTGCATTAAA 101358 Query 26335 TAATGTCGGTGTAGCATGAGTATAATAT 26362 | || || | || || ||| | ||| Sbjct 101357 AAGCGTGGGCGAGGCGTGTGTAAAGTAT 101330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037973861275