Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-23 seq482 122 1e-21 seq318 96.9 4e-14 seq115 93.3 5e-13 >seq2 Length=850095 Score = 127 bits (140), Expect = 2e-23 Identities = 93/108 (86%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| || |||||||| |||||| | || |||||| | || |||||| | || |||||| Sbjct 425261 GCCGCAAATTACCTCGATATCAAGGCCCTTCTCGATGTCGGTTGCAAGACCGTTGCCAAC 425320 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||||||||| || |||||||||||||||||||| |||||| Sbjct 425321 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATC 425368 >seq482 Length=325002 Score = 122 bits (134), Expect = 1e-21 Identities = 144/193 (75%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || ||||| ||| | |||||| |||| | |||||||||||| ||||||||| Sbjct 233313 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTC 233372 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||| || ||| |||||||||||||||||||||||| Sbjct 233373 TTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAAGATGCCCTCGACGGCGGCAAAG 233432 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| ||| || ||| || || | || | | |||||||||| |||||| Sbjct 233433 GCGACGAGACGCGACGCGAAG--GTAGA-GTTGTCATCGCAAATCCACTTCAATGCCCAG 233489 Query 869360 TCGGCCTTTTTCC 869372 |||||||| |||| Sbjct 233490 TCGGCCTTCTTCC 233502 Score = 89.7 bits (98), Expect = 6e-12 Identities = 214/316 (68%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||| ||| |||||| || || ||||| || |||| || || Sbjct 232998 GCCTTCTGGTAGTCACCCACACGCTTCTCGAAGAAATTCGTCTTTCCGGCGAGGGAAATA 233057 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || |||||| | ||||| ||| | || |||| || | Sbjct 233058 TTCTCCATGAAGTCAAAAGGGTTGACAGCATTGTAAACCTTGACATTGCCAAGCG-CGAG 233116 Query 868811 -AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 || || || || || |||||||| ||||| |||||||| || || | ||||||||||| Sbjct 233117 CAGTAGACGATCAGCAACAAACTCAATGTATTGGCACATAAGTCCCGAGTTCATGCCGAG 233176 Query 868870 GAG-CGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 || | || || || | |||||||| ||||| | |||||| | || ||||| | Sbjct 233177 CAGTCTGCA-TGGTAGAGCCTCGCTCAAGAACTCCTGCTCGATTTGTACTGCCTCAGTAA 233235 Query 868929 TGATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 |||| || || | | || | ||| ||||| ||| |||| | | | || |||||| Sbjct 233236 TGAT-AGCGCGGACGGCTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAAAGGAGGCAG 233294 Query 868988 GCAAAGTCGCAGTGCA 869003 || || ||| ||||| Sbjct 233295 GCGAAATCGGTGTGCA 233310 >seq318 Length=888528 Score = 96.9 bits (106), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| || ||||| || || || || |||||||| || | || || || ||| Sbjct 700409 GACAGCATTGGTGGCACAGTTACCTGTGTTCTGCGCAACGTTCCTGTGGGACTGGGAGAG 700350 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || || |||||||| | |||||| |||||| ||||||||||| ||||| || | || Sbjct 700349 CCTTGTTTTGACAAATTGGAGGCCAAGCTCGCGCACGCCATGCTTTCGATACCATCGACG 700290 Query 19167 AAGGGATTCGAGATTGGC 19184 || || |||||||| ||| Sbjct 700289 AAAGGCTTCGAGATCGGC 700272 >seq115 Length=330173 Score = 93.3 bits (102), Expect = 5e-13 Identities = 176/259 (68%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||||||||| || || ||| ||||| ||||||||||| || || ||||| || Sbjct 101605 TGATCGACGTAGCGAGCAGTCGCGTCGAAGACACGGAGCATGGGAACAAGCCCGTTTGAT 101546 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||||| || || | | ||| | |||| ||| | | |||| | | || Sbjct 101545 GTGCCGTTTGTTCCTCCAATGTATGATCCGGTGGCTCTGATACGGTGCACATTGAGACCA 101486 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || ||||| || | ||| || || | ||| || || || |||||||| || ||||| Sbjct 101485 ATACCGCCAGCGGTCTTCGAAATCATCGCACAAGTCTTAAGGGTGTCGTAAATACCCTCA 101426 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||| | || | || | ||| ||||| |||||| || || || | ||||| Sbjct 101425 ATGCTGTCCTCTTTTGTATCGATGAGGAAGCAAGACGAGAGCTGTGGTTGAGGTGTGCCT 101366 Query 1630306 GCGTTGAAGAGCGTGGGCG 1630324 || || || |||||||||| Sbjct 101365 GCATTAAAAAGCGTGGGCG 101347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107085283503269