Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq115 134 1e-26 seq52 116 3e-21 seq519 100 3e-16 >seq115 Length=330173 Score = 134 bits (148), Expect = 1e-26 Identities = 523/811 (64%), Gaps = 31/811 (4%) Strand=Plus/Minus Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATC 138492 |||||||||||||| |||||| || | ||| || || || | || || | Sbjct 102780 GCAATGATGCGATTCTTCATGTTGTCAGACCAGAGACCCATCTCGACGAGATCCTTGAGT 102721 Query 138493 AGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTG 138552 || || ||| | |||||| || || || || | ||||||||| ||| ||||| Sbjct 102720 AGCCATGGGTTAACGACCTGGAACTCTCCAGCAAGCACTCGACGAGAGTAGATGTTCGAC 102661 Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||| | ||||| || | || ||| || |||||||||| |||| || |||||||| Sbjct 102660 GTGTATGGCTCGAAGCACTCATTGAAACCGAGAATCTGAGATGTGGAAGCAGTCGGCATA 102601 Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGAC 138672 || || | ||| ||||| || | |||||| |||||| |||||||||| | Sbjct 102600 GGAGCAACAAGAAGCGAATTGCGGACACCGTGCCTCTTGATATCAGCCTTGAGCGAGTCC 102541 Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCC----CAA 138728 |||||||| | ||| | ||| | ||||||||| |||||||| | || || || Sbjct 102540 CAGTCCCAGAGATCAGTGGGTGTGACGTTCCACATGTCGTACTGGAGAATGCCTTGGGAA 102481 Query 138729 ACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCT 138788 | |||| ||||||||| || | |||| ||| ||||||||| | || | | Sbjct 102480 A----CGGGTGAGCCTTCGTAGGACTTGTATGTACCCTCCTCTTGCGCGAGCTTGCAGGA 102425 Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848 || || || | | || || || ||| || || |||||| | || || Sbjct 102424 CGAGGTCAGAGCGGCGTGATAGATTGTCTCGAAGATTTGAATGTTGAGCTTTTTTGCTTC 102365 Query 138849 GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCAC 138908 | |||| | || | |||||| ||| || || || || || ||||| || || Sbjct 102364 AGGAGACTCGAAGGGTAGACGGAGCGCAAGGAAAGCATCAGCAAGACCCTGCACACCGAC 102305 Query 138909 TCCGACAGGGCGATGGCGCAGATTTGACGCTTTTG-CGGCTTC---GATAGGATAATAGT 138964 ||||| || ||||| || ||| || ||| ||| ||||| | || || | || Sbjct 102304 ACCGACTGGACGATGACG-AGAGTT---GCTGTTGTATGCTTCAGGAACGGGGTAGTGGT 102249 Query 138965 TTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT- 139023 | ||||| ||||| ||||| |||||||| |||||| || | || | | | | | | Sbjct 102248 TGACATCAATGATCTTGTTCAAATTTCGGACGACCGTCTGA-ACGACTTCGTGCAACTTG 102190 Query 139024 TCAAAATCGTATGTGCCCCCGTTG-TCGTCGACG-ACGTCGACAAATTTGTTGACACAAA 139081 | ||||| || | || ||||| |||| ||| | |||| || || | | Sbjct 102189 TTGAAATCATA-GACGCCGCGTTGCACGTCAACGAAGGTCGGCA---------ACGC-CA 102141 Query 139082 TCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCAC 139141 | || || | ||||||||| || || || || || | |||||||| || || | | Sbjct 102140 TGGATGCCAAGTTGCACACAGCGACCTCATCTGGCGCAGAGTATTCGATGATCTCAGTGC 102081 Query 139142 ACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCAT 139201 |||| || | ||| || || || || | || || || || || || ||||||| Sbjct 102080 ACAAGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTACTCTTGCGATTGCAAGCAT 102021 Query 139202 CTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232 |||| ||||||||| | || |||| || || Sbjct 102020 CTTTATAAAGCATAAAAGGGTTGCCGGTCTC 101990 >seq52 Length=836814 Score = 116 bits (128), Expect = 3e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 24726 TAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAA 24784 |||| || || || || || ||||| || || ||| |||||| | || |||| || | Sbjct 426293 TAACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGA 426352 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 | || |||||||||||| || || || || || || ||||| |||||||||||||| || Sbjct 426353 CCAA-GATCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGC 426411 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 ||||||||||||||| | | | |||| || || || || || ||||| || ||||| Sbjct 426412 AAACAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCTACACTC 426471 Query 24905 CAC 24907 ||| Sbjct 426472 CAC 426474 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || ||||| |||||||| ||| | || Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || ||||| ||| || ||||| |||||||| || || || || Sbjct 426787 GATACGATCGACAACGTCAAGACAAA-GATTCAGGACAAGGAAGGAATCCCACCAGACCA 426845 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | ||||| || || || || ||||| || | | || || || || Sbjct 426846 GCAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGACGTACGTTGAGCGACTACAA 426905 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||||||| |||||| | ||||||||| | || | || || ||| Sbjct 426906 CATTCAAAAGGAGTCGACATTGCACTTGGTGCTACGTCTCCGTGGCGGC 426954 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || ||||| || || || | || || ||| || | Sbjct 426499 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACCATCACATTGGAGGTTGAATCCTCA 426558 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||| ||||| |||||||| || || || || || || Sbjct 426559 GACACCATCGACAACGTCAAGACCAAA-ATCCAGGACAAAGAGGGTATTCCACCGGACCA 426617 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || | ||||| || || || || || ||||| | | | |||| || || || Sbjct 426618 ACAGCGACTTATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCCTGTCCGACTACAA 426677 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || |||||||| || || | ||||| || Sbjct 426678 CATCCAGAAGGAATCAACTCTGCACTTGGTCTTACGTCTTCGCGGTGG 426725 >seq519 Length=112231 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| || ||||| || || || || || || || ||| | | |||||| | || | Sbjct 63369 AAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATCGACAAT 63310 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| || ||||||||||| || || || ||||| || ||||||| Sbjct 63309 GTCAAGACTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGCTGATCTTC 63250 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 ||||| || |||||||||||| | | | || || || ||||||||||||| Sbjct 63249 GCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAAAGG 63195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893905215960